Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1225 ATGTTGGGAGAAGGCAATGATAATGAGAGTGAGATGAGTGCAGATGATGAAGGGCATCATCAGCAACAGAAGCTCACCATTTTCTATGATGGCGAAGTTTGTGTTTCTGATGTCACCGAACTTCAGGCTAGGTGGATAATGAAGGAAGCAGGAAAAGAAATGGAGGAGAAAATGAATAGATCATCATCATTCCCATCATCATCATCATCATCACAGAATCAGAGTCAGATGTGTAGCCCTAATTACAGTGCACTTTCCATGAAGAGATCTCTCCAACGTTTCCTTCAGAAGCGAAAGGATCGCATCCACGAATCTTCCCCTTACCATCCTTAA 333 0.4264 MLGEGNDNESEMSADDEGHHQQQKLTIFYDGEVCVSDVTELQARWIMKEAGKEMEEKMNRSSSFPSSSSSSQNQSQMCSPNYSALSMKRSLQRFLQKRKDRIHESSPYHP 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1225 110 MobiDBLite consensus disorder prediction 52 110 - -
Lele36g1225 110 Pfam tify domain 21 50 IPR010399 -
Lele36g1225 110 MobiDBLite consensus disorder prediction 60 90 - -
Lele36g1225 110 MobiDBLite consensus disorder prediction 1 23 - -
Lele36g1225 110 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 109 IPR040390 -
Lele36g1225 110 Pfam Jas motif 88 108 IPR018467 -
Lele36g1225 110 ProSiteProfiles Tify domain profile. 18 52 IPR010399 -
Lele36g1225 110 SMART tify_2 18 52 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1225 Lele-ChrLele36 14684494 14686079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1225 9 109 Tify Gene Family AT1G30135 48.039 8.02e-23 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele36g1225 tify 1.6e-11 No_clan