Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1207 ATGTGTTGTTGGGTTTCTTTGATCTGGCTTGTCCTCCTCCTTATATTTCTAATTTGTATGATTGGAGCCGAGAAAATTGGACATTTGACTCTGTTGCCTCTGCCACCAAAAAGAAAGATGAATCAAGCAAAGCCTGTTCCTAATTCAAGTCTAATTGGCAGCAATTTATTAGTTCATGGTCAGCATTTAGATTGTGGTGGTAGTGCAATGGATCATCTCAATGGAGGTAGCAATCCTACCAACAACTCTTATCTCAGCTCAAAGCAACGTTTACGCTGGACACATGAGTTGCATGAACGTTTTGTTGATGCTGTGGCACAACTTGGAGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCAGAAGTATGGGTGTGCAAGGCTTAACAATATATCATGTCAAAAGCCATTTACAGAAATATCGACTTGCAAAATACCTCCCTGATTCCTTGTCCGATGGGAAAAAAGCTGAAAAGAAAGAAACAGGGGACATGCTTTCCAATCTAGACGGCTCTTCTGGTGGGATGCAAATTACTGAAGCACTGAAGCTACAGATGGAGGTGCAGAAGCGACTGCATGAGCAATTAGAGGTTCAGAGACAACTTCAACTACGGATAGAAGCCCAGGGTAAATACTTGAAGAAGATAATTGAAGAACAGCAGCGGTTCGGTGGGGTTCTGTCGGAATCACCATGCTCAGGTGTTGATGCTCCAGCATCGGCTGATGGATGTCAAGAACCTGAGAATAAGACTGACCCAGCTACCCCAGCTCCAACCTCTGAGTGCCCCCTCCTAGATAAAGCAGCCAAAGAATGCGCCGCAGCAAAGAGTCTGTCTATCGATGAATCGTTCTCATCTCACCACGAACCATTGACTCCGGATTCTGGCTGCAATGCCGGCTCACCTAATGAAAGCCCAAAAGGGGAGAGACTGACGAAGAAGCGCCGTGTGAGCATGGAGGGAGCATATTGTAAATCAGAAATGATGCTTCCACATCAGATACTCGAATCAAGCATGCCATCATACCAGCAGTCAAACAATGTTTTCCTCACCGGGGAGCAGTTTGATCCTTCATTGGGTATATCTACTAGGAGTGAGGAGGCATTGCAAAAGGTTGGTGGCGGCAATCTGTGA 1131 0.4589 MCCWVSLIWLVLLLIFLICMIGAEKIGHLTLLPLPPKRKMNQAKPVPNSSLIGSNLLVHGQHLDCGGSAMDHLNGGSNPTNNSYLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRSMGVQGLTIYHVKSHLQKYRLAKYLPDSLSDGKKAEKKETGDMLSNLDGSSGGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRFGGVLSESPCSGVDAPASADGCQEPENKTDPATPAPTSECPLLDKAAKECAAAKSLSIDESFSSHHEPLTPDSGCNAGSPNESPKGERLTKKRRVSMEGAYCKSEMMLPHQILESSMPSYQQSNNVFLTGEQFDPSLGISTRSEEALQKVGGGNL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1207 376 MobiDBLite consensus disorder prediction 282 301 - -
Lele36g1207 376 FunFam Myb family transcription factor 87 145 - -
Lele36g1207 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 145 IPR017930 -
Lele36g1207 376 SUPERFAMILY Homeodomain-like 86 142 IPR009057 -
Lele36g1207 376 Coils Coil 178 198 - -
Lele36g1207 376 MobiDBLite consensus disorder prediction 152 171 - -
Lele36g1207 376 MobiDBLite consensus disorder prediction 282 315 - -
Lele36g1207 376 Pfam Myb-like DNA-binding domain 91 141 IPR001005 -
Lele36g1207 376 MobiDBLite consensus disorder prediction 226 261 - -
Lele36g1207 376 Gene3D - 87 146 - -
Lele36g1207 376 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 86 366 IPR044848 GO:0003700
Lele36g1207 376 Pfam MYB-CC type transfactor, LHEQLE motif 175 221 IPR025756 -
Lele36g1207 376 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 88 143 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1207 Lele-ChrLele36 14575864 14579675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1207 123 376 G2-like Transcription Factor Family AT2G01060 65.098 2.84e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele36g1207 Myb_DNA-binding 3.5e-08 CL0123