Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1206 ATGTTTCCGAGACTAATACATCCCCATGAAAGCTTAATCGAAGATTTGGAGGCTGCTTCGAACCACAACAATCACAAGGGAGACCCATGTCTGGTTTTGACCGCCGATCCCAAACCTCGCCTCCGATGGACCCAGGACCTCCATGAACGATTCGTCGATGCTGTCACCCAGCTCGGGGGTGCTAGTAAAGCTACACCGAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTTTTTCATTTGAAGAGCCATCTTCAGAAATACAGAATTGGTAAACAATCAGGGAAAGATATGAGTGAAGCATGCAAAGATGGGATGTCAGGGTCTTATCTTCTAGAAAGCCCCGGTACTGATAACAACTCTCCAAAGTTGCCGGCTTCTGATACAAATGAGGGTCATGAGATCAAAGAGGCGTTAAGAATTCAGATGGAAGTGCAAAGTAAACTTCATTTGCAAGTAGAGGCAGAGAAGCACTTGCAGATTCGCCAAGATGCAGAGCGGCAGTACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCGGATCAATTCATCAGCGCGACAGTTATAGAGCCACCAGATGGCCAAAAAGCTCAAGATCATGTCGGAAGTAAAGCACCGAGTGGTTCCCTGCTTGATTCTCTAGGATTCTACTCCTTACCATCTGCCGATGTAGCTGGAGTGCATGTCTCGGAGGAAAAAATCATGCCTAGTTTCGAGCGGCCTAGGACCGGCTGTTCCACGGAAAGTTGCCTAACATCGCGTGAGAGTTCTAACGTGCTCGCTTCAGAAGGATCTCCAGATGGAGGTAAAAAGAGGATGCTGAGCTTGGACCCTATGGCACCACCACCACCGATCTGGAGTGAAGCCAAAATGAGAGTTCAAGACATGAATGTAGCCCAAGGTAATATTCATGGAATAACCAGGTACTTTGATGTGAGAGAAAGAGATGATGGAATAGGTCCTACATCTTATAGCTCCATTACTGAAGAATATCCGTACCTGGTTTAG 1017 0.47 MFPRLIHPHESLIEDLEAASNHNNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRIGKQSGKDMSEACKDGMSGSYLLESPGTDNNSPKLPASDTNEGHEIKEALRIQMEVQSKLHLQVEAEKHLQIRQDAERQYMAMLERACKMLADQFISATVIEPPDGQKAQDHVGSKAPSGSLLDSLGFYSLPSADVAGVHVSEEKIMPSFERPRTGCSTESCLTSRESSNVLASEGSPDGGKKRMLSLDPMAPPPPIWSEAKMRVQDMNVAQGNIHGITRYFDVRERDDGIGPTSYSSITEEYPYLV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1206 338 Pfam Myb-like DNA-binding domain 41 91 IPR001005 -
Lele36g1206 338 Gene3D - 37 95 - -
Lele36g1206 338 MobiDBLite consensus disorder prediction 245 266 - -
Lele36g1206 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 17 264 IPR044848 GO:0003700
Lele36g1206 338 Pfam MYB-CC type transfactor, LHEQLE motif 136 181 IPR025756 -
Lele36g1206 338 MobiDBLite consensus disorder prediction 242 273 - -
Lele36g1206 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 95 IPR017930 -
Lele36g1206 338 MobiDBLite consensus disorder prediction 114 129 - -
Lele36g1206 338 FunFam Myb family transcription factor 37 95 - -
Lele36g1206 338 MobiDBLite consensus disorder prediction 110 131 - -
Lele36g1206 338 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Lele36g1206 338 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 38 93 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1206 Lele-ChrLele36 14566627 14571232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1206 23 256 G2-like Transcription Factor Family AT3G24120 43.802 4.94e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele36g1206 Myb_DNA-binding 6e-06 CL0123