Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1202 ATGATCAGATTGTTCCGTCCCACTAACTATACCACACGATCATGTATCTCTCTGTCAGCACATTCTATTTCTTCTCAATTAACCCACCTCCAACATTACCAATCCACGGCTTCTATAGAATTCGATTCCCATTTCTACGCAGCTACGCTACAAAAATGCATACAAAACGGTGACTACGACTCCGGAAAAGGCCTTCACTGTCACATCATTAAGACAGGCGCATCTTTGGACTTATTCGCATTCAACGTTCTTCTTAATTTGTATGTAAAGTCTGATTCTTTGTCCGATGCATCTCAACTGTTCGACGAAATGCCCAGCAGTAATACTGTCTCCTTCACTACATTGGCTCAGGGTTACATGCGGTCACTTCAATTCCCTGCCGCTCTCGACTTATTCCTTAGGTTATTCAGAGGAGGCCACCAGCTTAATCCTTTTTTTTTCACATCCATTCTCAAGTTGCTTGTCAGTATGGACAGCGCACAGATGTGTTTCGCCGTTCATTCATTTATTTATAAGCTTGGTTATCACTCTGACGCATTTGTTGGTACTGCTCTTATTGATGCCTACTCTGTTTGTGGATGTGTTGAGATTGCTAGAAATGTTTTTGATGACATTCTTTATAAGGACATGGTCACTTGGACTGGCATGGTAGCTTGTTATGCTGAGAATGACTGCTTTTACCGTTCATTACAACTTTTCTCCTACATGAGGCTAACAGGATACAAGCTAAACAACTTTCTCATCACTGCGGTGCTCAAGTCCTGTCTTGGCCTACAGGCCTTTCGGCTTGGCATGAGTATTCATGCATGTGCTTTGAAAACTCATCATGAACAGGATCTTTATGTTGGGCTCGCATTGCTGGAATTATATAGTAAGGCCCAAGACCTTTATGCTGCACGGCAATTTTTTGAGGAAATGCCTAAAAATGATCTTATTCCTTGGAGTCTAATGATTGCTCGGTATGCTCAGAGTGACAAAAGTAGTGAGGCTTTGGAATTGTTCCAGCGTTTGAGGCAAACATCCATTGTCCCTAATCAGTATACATTCGCTAGTGTGTTTCAAGCTTGTGCCAATTTACCTGCATTAAATTTGGGAGAGCAAATTCATTCTTATGTCCTGAAAGTTGGTCTTGACTCAAATGTTTTTGTCTCTAATGCCCTAATGGATGTTTATGCCAAGTGTAGGGAAATGGAGAACTCAATGAAATTATTTGTGGAATCACCTGAGCATAATGACGTGACTTGGAATACCATGATTGTTGGTTATGTGCAGTTAGGAGACGAGGAGAAGGCACTAAATATGTTTGTATCCATGCTTGCTTATTCCATACAACCAACTGAAGTGACATACTCAAGTGTTCTTCGTGCCTGTGCAAGTTTAACATCATTGAAGCAAGGACATCAGGTTCATTCTTTAACTGTCAAAACCATATATGATAAAGACACTGTAGTTGCCAATTCATTGGTAGATATGTATGGCAAATGTGGTAGCATTCGTGATGCCCGAATAGTATTTGATAAGATGGGAAAACGAGATGAAGTTTCATGGAATGCTATGATATGCGGATATTCCATGCATGGCCTAGGTGTGGAGGCCCTAAATACGTTTGAAATGATGCAACAGTCTAATTGTAAACCAAATAAGCTAACCTTTGTTGGTGTCCTATCTGGATGTAGCAATGCAGGACTGCTAGATAAGGGACAAGAGCTCTTTAAGTCAATGATGCAAGACTATGGCATCGAACCATGTATAGAACATTATACTTGTATGGTTTGGCTCCTTGGAAGGTCAGGCCATCTTGAGAAAGCAGTGAAACTCATTGGTGAGATTCCATTTCAGCCTAGTGTTATGGTGTGGCGAGCATTGCTTGGTGCTTGCGTCATCCATAATGATATTGATCTTGGAACAGTTTGTGCCCAACGTGTACTTGAGATGGATCCACACGATGATGCAACCCATGTACTTCTTTCTAACATGTATGCCACAGCAAGGAGATGGGACGGTGTTGCTTCTATTAGAAAAATTATGCACATAAAAAGAGTCAGGAAAGAGCCAGGGTTAAGTTGGATTGAGGATCAAGGTGTGGTTCACTATTTTACTGCAGGGAACACCAGTCACCCTGACATTAAACTTATCAGTGCAATGCTTGAATGGTTAAACATGAAGACTAGGGAGGAAGGATATGTACCCAATATCAATGCTATTTTGCTCGATATGGAGGATGCTGAAAAAGCACGTCTCTTGTGGGTTCACAGTGAAAGATTAGCTCTGGCATTTGGACTGATTCGATTGCCATGTGGTTGTCCTATACATATCATAAAAAATCTCCGTATATGTGTAGATTGCCACATCGTTATGAAGTTGATATCCAAAATTGTGCAGCGAGATATTATTATCAGAGATATGAATCGGTTTCACCATTTTCAGCATGGTATTTGCTCCTGTGGTGAAGTTGTATATGCAAATGATCATGTCATAGCATTAGCTTTACGTTTTATCCTTTTCAGATCTTCCTATTCTGTTGCAAAAGAGGGCGTAGAAAGTAGATGTGTTGCTTTTCTGTTGAAAATGGGCGAGAGAAAGTTTCATGAATTGCTCTGTCTTCCCCTTCTTCTCAACTTCTTGTTGCTTTCATTTTCAGAATCAGCTTCCATGGAGGAAGATGTGATTGCCCTAAATTCTCTGAAGAACCTAATGCGAAAGGTACCCCAAAGTTGGGAGAGTTCGGATCCTTGCAATGGCTGGGAGGGAATTACCTGCGCCCAATCTCGTGTTACTTCCATAAAATTAGCAGGCATGGATTTAAATGGCCAGCTTTCTGCAGACATTGGATCGTTCTCCGAATTACAGGCTTTGGATCTCTCTTTCAATAAGTACCTAGGAGGACCACTTCCAAAAGAAATTGGAAGTTTGAAGAAGCTGGAGGAATTATTTCTTGTTGGTTGTGGTTTCACTGGTCCTATTCCAGATGAAATTGGATCATTGCTAGAGCTTGCCTATCTATCTCTAAACTCTAACAGCTTTAGTGGAAGAATTCCAGCTTCCATTGGGAATCTATCAAAACTGCGATGGCTAGACTTAACTGATAATCAACTTGTTGGACCTCTTCCAGTATCAAGTGGAGCTACTTCTGGTTTAGATATGCTACTCAATGCACTGCACTTTCATCTTGGGAACAACAACCTCTCAGGAGATATTCCTCCAGAACTTTTCAGCTCAAATATGGCTCTGATACATTTGATCTTGAATAGCAATGAACTTACTGGAAATATTCCTGATACACTTGGACGTGCTCAAAATCTTACGGTGGTGCGCTTGGAAAATAATTCTTTGACTGGCTTTGTACCTCAGAATGTGACAAACCTCCACAATGTTACAGACCTGATCCTGTCTAACAATAATCTGTTGCGTACCATTCCAAACCTCAGTGGAATGACTTCTCTCCAATACTTGGATATGAGCAACAATAGCTTTGAGCCAACGGAATTTCCATCATGGCTTCAAAATTTACCGAGTTTAAAATCACTAATAATGGAAAACACAAATCTTGAAGGGCAGATTCCTGCTGCATTTTTTAGTCTAGCCAATTTAAAGACTGTGGTTCTGAAAGACAATAAACTCAGTGGAAGCCTGGACATTGGCACCAACTACAGCAAACAACTGCAACTGATTGATTTGCAGAATAATAATATCGAGGATTTTAACAAACGAGATGAAGCTTCAAGGATCACAATAATACTCGTCGGCAACACTGCTTGTTATGAAACAGGTTCTGAAACAAGCACTCTCTGCACCATTCATGATAAACCGCCTGCAGAATTGCCCAAGAACTGTGTGCCTGTTGCATGCACTGTCCCAAATCAGATTTCTAGTCCCAATTGCAAGTGCGCATATCCATATGAAGGAACTTTATCTTACAGAGCTCCTTCTTATATGATAAACAAAACTGCCCTTGAGGAAATTCTCTTGGAAAAATTCCAATCCTCTCATCTGCCTGTGGATTCTGTTTATGTGATCAATCCAACCTGCTCTCCATTTCAGTGTTTTAAACTCGCCGTACAAATTTTCCCTTCAGGCCAAGATCACTTCAATCAAACAATGATATCTAAAATAAGTGTGCTGTTAAGTAACCTCAGCACAACTGAAGCATATACTTTCATTCTTGGTCTTGATAACTATGGACTTGAAAGTTCAAGGAAGTCATCAAACACCCGAATCATAATCGGAGCTGCAGTTGGGGGTTCTGTGTTGCTTGGGCTATTTCTCCTAGCAGGTGTTTATGCGTTTTGCCAAACAAGAAGAGCAGAAAAGGCAATGGAAGAAAGCAATCCATTTGGACACTGGAATCTAAGTCACAATAGTAGTACCAAACCTGAGTTACATGGAGCAAGGAGGTTCTCTTTCAAAGAACTTGAGGAATACACGAACAATTTTTCACAAGCCAATGAGATTGGATCTGGGGGTTATGGGAAGGTTTCTCGGGGAACTCTTCCCAATGGACAACTAGTTGCAATAAAACGAGCTCAGAAACAATCAAATCAAGGTGGACTTCAGTTTAAAGCTGAGATTGAACTCCTTTCAAGAGTCCACCATAAGAATTTGGTTAGCCTTGTGGGATTCTGCTTCGAACGAGGAGAACAAATGCTAGTTTATGAATTTGTTCCTAATGGAACCTTGAAGGAGAGCATCTCAGGGAAGTCCAGTATAAGATTAGACTGGACTAGAAGGTTAAAAGTAGCCCTTGATACGGCAAGGGGTTTGGCTTATCTCCATGAACATGTCAATCCTCCTGTTATACATAGAGACGTTAAATCAACCAACATTTTGCTGGATGAACACTTGAATGCTAAAGTTGCCGATTTCGGTCTTTCCAAGCCTATGGGCGATTGTGAAAAAGATCACGTTACTACACAAGTTAAAGGAACAATGGGCTACTTGGATCCGGATTATTACACAACTCAACAGTTGACTGAGAAAAGTGATGTCTATAGCTTTGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAAACCAATACAAGGAGGGAAACATATTGTGAAAGTATTTAGGAGTACAATTGATAAGACAAAAAACTTTCATGGACTTCAAGAAATTCTTGACCCAGCTCTTGTTGGCTTAGGCTCCGCATTGATGGAACTGGAGAACTTCGTTGATCTTGCGATGAAGTGTGTTGAGGATTCCAGAGCAGACCGACCGACGATGAGCAATGTAGTGAAAGAAATAGAAAGCATGTTGAAGTCTGCTGGTTTGAACTCTATAGCTGAGTCATCAGCATCTAATTCAGCTAGCTTTGAGGAGGTAAGTAATGTGACTTCACAGCTTGTTCTCAACAGCAATGAGAATTCAAGTTCATTCTGCAATATCAGAAAGATTGAGCCAAAGTAA 5406 0.4075 MIRLFRPTNYTTRSCISLSAHSISSQLTHLQHYQSTASIEFDSHFYAATLQKCIQNGDYDSGKGLHCHIIKTGASLDLFAFNVLLNLYVKSDSLSDASQLFDEMPSSNTVSFTTLAQGYMRSLQFPAALDLFLRLFRGGHQLNPFFFTSILKLLVSMDSAQMCFAVHSFIYKLGYHSDAFVGTALIDAYSVCGCVEIARNVFDDILYKDMVTWTGMVACYAENDCFYRSLQLFSYMRLTGYKLNNFLITAVLKSCLGLQAFRLGMSIHACALKTHHEQDLYVGLALLELYSKAQDLYAARQFFEEMPKNDLIPWSLMIARYAQSDKSSEALELFQRLRQTSIVPNQYTFASVFQACANLPALNLGEQIHSYVLKVGLDSNVFVSNALMDVYAKCREMENSMKLFVESPEHNDVTWNTMIVGYVQLGDEEKALNMFVSMLAYSIQPTEVTYSSVLRACASLTSLKQGHQVHSLTVKTIYDKDTVVANSLVDMYGKCGSIRDARIVFDKMGKRDEVSWNAMICGYSMHGLGVEALNTFEMMQQSNCKPNKLTFVGVLSGCSNAGLLDKGQELFKSMMQDYGIEPCIEHYTCMVWLLGRSGHLEKAVKLIGEIPFQPSVMVWRALLGACVIHNDIDLGTVCAQRVLEMDPHDDATHVLLSNMYATARRWDGVASIRKIMHIKRVRKEPGLSWIEDQGVVHYFTAGNTSHPDIKLISAMLEWLNMKTREEGYVPNINAILLDMEDAEKARLLWVHSERLALAFGLIRLPCGCPIHIIKNLRICVDCHIVMKLISKIVQRDIIIRDMNRFHHFQHGICSCGEVVYANDHVIALALRFILFRSSYSVAKEGVESRCVAFLLKMGERKFHELLCLPLLLNFLLLSFSESASMEEDVIALNSLKNLMRKVPQSWESSDPCNGWEGITCAQSRVTSIKLAGMDLNGQLSADIGSFSELQALDLSFNKYLGGPLPKEIGSLKKLEELFLVGCGFTGPIPDEIGSLLELAYLSLNSNSFSGRIPASIGNLSKLRWLDLTDNQLVGPLPVSSGATSGLDMLLNALHFHLGNNNLSGDIPPELFSSNMALIHLILNSNELTGNIPDTLGRAQNLTVVRLENNSLTGFVPQNVTNLHNVTDLILSNNNLLRTIPNLSGMTSLQYLDMSNNSFEPTEFPSWLQNLPSLKSLIMENTNLEGQIPAAFFSLANLKTVVLKDNKLSGSLDIGTNYSKQLQLIDLQNNNIEDFNKRDEASRITIILVGNTACYETGSETSTLCTIHDKPPAELPKNCVPVACTVPNQISSPNCKCAYPYEGTLSYRAPSYMINKTALEEILLEKFQSSHLPVDSVYVINPTCSPFQCFKLAVQIFPSGQDHFNQTMISKISVLLSNLSTTEAYTFILGLDNYGLESSRKSSNTRIIIGAAVGGSVLLGLFLLAGVYAFCQTRRAEKAMEESNPFGHWNLSHNSSTKPELHGARRFSFKELEEYTNNFSQANEIGSGGYGKVSRGTLPNGQLVAIKRAQKQSNQGGLQFKAEIELLSRVHHKNLVSLVGFCFERGEQMLVYEFVPNGTLKESISGKSSIRLDWTRRLKVALDTARGLAYLHEHVNPPVIHRDVKSTNILLDEHLNAKVADFGLSKPMGDCEKDHVTTQVKGTMGYLDPDYYTTQQLTEKSDVYSFGVLMLELITARKPIQGGKHIVKVFRSTIDKTKNFHGLQEILDPALVGLGSALMELENFVDLAMKCVEDSRADRPTMSNVVKEIESMLKSAGLNSIAESSASNSASFEEVSNVTSQLVLNSNENSSSFCNIRKIEPK 1801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1202 1801 Pfam Protein kinase domain 1479 1746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g1202 1801 SUPERFAMILY L domain-like 905 1243 - -
Lele36g1202 1801 Pfam Leucine rich repeat 1100 1157 IPR001611 GO:0005515
Lele36g1202 1801 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 512 546 IPR002885 -
Lele36g1202 1801 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 481 511 IPR002885 -
Lele36g1202 1801 FunFam Leucine-rich repeat family protein 887 1041 - -
Lele36g1202 1801 Pfam DYW family of nucleic acid deaminases 727 817 IPR032867 GO:0008270
Lele36g1202 1801 FunFam Pentatricopeptide repeat-containing protein At2g40720 33 160 - -
Lele36g1202 1801 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 208 756 - -
Lele36g1202 1801 SMART serkin_6 1478 1752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g1202 1801 Pfam Leucine rich repeat N-terminal domain 886 920 IPR013210 -
Lele36g1202 1801 SUPERFAMILY Protein kinase-like (PK-like) 1464 1761 IPR011009 -
Lele36g1202 1801 Gene3D Ribonuclease Inhibitor 1046 1242 IPR032675 -
Lele36g1202 1801 Gene3D Tetratricopeptide repeat domain 20 156 IPR011990 GO:0005515
Lele36g1202 1801 Gene3D Tetratricopeptide repeat domain 482 710 IPR011990 GO:0005515
Lele36g1202 1801 FunFam receptor-like protein kinase FERONIA 1444 1553 - -
Lele36g1202 1801 ProSitePatterns Protein kinases ATP-binding region signature. 1484 1506 IPR017441 GO:0005524
Lele36g1202 1801 FunFam Putative pentatricopeptide repeat-containing protein, mitochondrial 362 476 - -
Lele36g1202 1801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1598 1610 IPR008271 GO:0004672|GO:0006468
Lele36g1202 1801 Gene3D Tetratricopeptide repeat domain 261 365 IPR011990 GO:0005515
Lele36g1202 1801 Gene3D Tetratricopeptide repeat domain 366 471 IPR011990 GO:0005515
Lele36g1202 1801 Gene3D Tetratricopeptide repeat domain 157 260 IPR011990 GO:0005515
Lele36g1202 1801 Gene3D Ribonuclease Inhibitor 885 1045 IPR032675 -
Lele36g1202 1801 Gene3D Transferase(Phosphotransferase) domain 1 1554 1774 - -
Lele36g1202 1801 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 310 344 IPR002885 -
Lele36g1202 1801 Pfam E motif 629 691 IPR046848 -
Lele36g1202 1801 FunFam Pentatricopeptide repeat-containing protein, chloroplastic 485 714 - -
Lele36g1202 1801 TIGRFAM PPR: pentatricopeptide repeat domain 80 108 IPR002885 -
Lele36g1202 1801 TIGRFAM PPR: pentatricopeptide repeat domain 413 446 IPR002885 -
Lele36g1202 1801 TIGRFAM PPR: pentatricopeptide repeat domain 514 547 IPR002885 -
Lele36g1202 1801 FunFam Putative pentatricopeptide repeat-containing protein, mitochondrial 166 260 - -
Lele36g1202 1801 Pfam PPR repeat family 512 559 IPR002885 -
Lele36g1202 1801 Pfam PPR repeat family 411 458 IPR002885 -
Lele36g1202 1801 Gene3D Phosphorylase Kinase; domain 1 1448 1553 - -
Lele36g1202 1801 FunFam Leucine-rich repeat protein kinase family protein 1042 1141 - -
Lele36g1202 1801 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 77 111 IPR002885 -
Lele36g1202 1801 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 1554 1765 - -
Lele36g1202 1801 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 547 582 IPR002885 -
Lele36g1202 1801 ProSiteProfiles Protein kinase domain profile. 1478 1752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g1202 1801 CDD STKc_IRAK 1484 1751 - -
Lele36g1202 1801 FunFam Pentatricopeptide repeat-containing protein mitochondrial 263 361 - -
Lele36g1202 1801 Pfam PPR repeat 183 206 IPR002885 -
Lele36g1202 1801 Pfam PPR repeat 314 338 IPR002885 -
Lele36g1202 1801 Pfam PPR repeat 211 237 IPR002885 -
Lele36g1202 1801 Pfam PPR repeat 586 610 IPR002885 -
Lele36g1202 1801 Pfam PPR repeat 80 107 IPR002885 -
Lele36g1202 1801 Pfam PPR repeat 385 406 IPR002885 -
Lele36g1202 1801 Pfam PPR repeat 484 511 IPR002885 -
Lele36g1202 1801 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 209 243 IPR002885 -
Lele36g1202 1801 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 411 445 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1202 Lele-ChrLele36 14519970 14533567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1202 888 1774 Receptor kinase-like Gene Family AT5G49760 52.159 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele36g1202 Pkinase 6.9e-46 CL0016