Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1197 ATGTCTGAAAGACCGGTTTCTGATCCTAGCAAGCTTCACCTCAAGAAGAAGGACCTCACTCAAATCCGTAAAGCTGCTCGTGTGTTGAGGGATCCCGGTACGACGTCGTCCTGGAAGTCTCCTCTTAGTTCCTCGAGATCCGTTACGGCTCGTTCTGCTTCTGCTTCTGCATGGAAGAACAATTTCTACAGAGGAAAAGAGAATAGCGTGTCCTTGCGCAACTGGGAGAATTACAAATCTTCAGGCGACAAGAGTAGAGTGGCAAAAAACGACGACGTAGAGGAAGAAAATGATGGTGATGGTGATGGTGATGGTGATGGTGAGGATGCTGTTGCTGCTTGTGGCGGCAACGACGGGTCTTCTTCATCTCTTCTGGGAAGTTTCGAGGATTCCTTGAGCGATGCTCGAGGTTTCGATTCGAAGAGCGACACTTGCTTGCGAGATGAGAGACCTTCTTCTATCTTCCGGTGTGGACTCACTAATCATCTTTCTTCGGCCAGAAGAAAAATGGGCAGCGTCAAGAGAAAGAGTAGGAAAAATAACACATATTTGGATAACTTATCAAAATATCGGCAACCAGAAACTAATTTGGGTAGGAAGTTTGTAAATTCCAGGACATTTCTAGAGAACTCAATTGAACAATCTGATGATACTGAAGATTACTGCAATTCTGAGGATTTAAGGCGAATTTTAGGGTCATCTCGTTTGCTGTTGAAACTCAAGCGTAAGAATTGGTCTCGTTCTTCCCCAAAGTTACGGAGAAGTAGCCAAACTGAGGACTCTTCTTATACTTATAGTACTCCTGCGTTATCAACATGCTCTTATAATAGGTATGGTCACTATAATTCAAGTACTGTTGGATCCTGGGATGTCACGACTAGCTCATTGAATGATGGTGATGATGAGGTAGACGATCATTTGGATTTGCCTCGCCAGAGGGGATGCGGGATTCCTTGCTATTGGTCCAAGAGGACTCCAAAGAATAGAGGGATTTGTAGGACTTGTTGTTCTCCTTCTCTTTCAGAGACTTTGAGGCGGAAAGGAAGTAGCTTATTCTGTGGAAGTCAAACTATTTATACAAGACACCGAAGGTCCTTATCAAGCTCTAACAAGTGGAGGGTTTCTTCAAGGAGCGCTCAGGGTGTTCTTCCACTGCTCTCCAGCAGTGGTGATGTTAGAGGAGGGTCATCAGTAGGAACTGGAAGGAGCGATGATGAACTTTCCTCAAACTTAAGGGAACTTTATCTCGAGGGTTTAAGCAGGTTAGATGGAAGGAGATGGTCATCAAGTTGTAGGAGTCAAGATGGTTTGGAGATTGTGCCTGTAGATGGGGAAGGTGATGAGGAAGGCACACAAGAAAATGCTATGAGTTTCAGTCAGAAGTATAAGCCTATTTCCTTTAGTGACTTGATTGGCCAGAATATTGTGGTTCAGTCACTTATGAAAGCTATTTCAAGGGATAGAATTGCTCCCATTTATCTTTTTCAAGGTCCTCGTGGTAGTGGTAAAACTTCAACAGCCAGAATTTTTGCTGCTGCCCTTAATTGTACAGCTCCTGATGTAAGTAAGCCTTGTGGATACTGCAGGAATTGCACTGATCTCAATTCTGGAAAGAGTAGGGATTTCTTGGAAGTTGATGGAAACAGTAAGCAAGGGATTGATAATGTTTGGTATCTATTGAAAAGACTATCAGTAGGATCACCATCAGCCTCCTCACGATACACTGTATGTGTGATAGATGAGTGCCACTTGCTTCCCTCTAAGACATGGCTGGCATTTCTGAAGTTTTTAGAAGAACCACCTAGTAGAGTTGTGTTCATATTTATAACAACTGATCTGGACAATGTACCACGAAGAATACAGTCTCGATGCCAGAAGTACCTTTTTAACAAAATTAAAGATGGTGATATTGTGGGCAGATTGCGGACACTATCTGCTGAGGAGAACCTGGATGTTGAAAAAGATGCGCTGGACCTTATTGCTATAAATGCAGATGGTTCGCTTCAAGATGCAGAAACTATGTTAGAACAACTGAGTTTGCTGGGGAAAAGAATTACTGCTTCACTTGTCAATGAACTTGTGGGTGTTGTCTCGGATGAAAAACTACTAGAGCTGTTGGAGTTAGCAATGTCATCAGATACCTCAGAAACAGTGAAGAGAGCCAGAGAAGTGATGGATTCTGTGGCTGATCCAATTATTTTGATATCACAAATGGCATGCCTCATTATGGACATCATTGCTGGATCATATACTGTCATTGATGCCAAACCTAGTGATTCGTATTTTGGCGGACGAAATCTGAATGAATCGGAGTTGGGGAGGTTAAAGCATGCTTTGAAGCTGCTCTCAGAGGCTGATAAACGCTTAAGGACTTCTAGTGAACGCTCAACATGGTTCACAGCTACTCTGTTACAGCTTGGTTCAATGCCTTCACCAGATCTTACCCAGTCAGGCAGCGGCAGGAGACAGAGCTGCAAGACTTCCGAATATGATCCATCAAGTGCTTCAAGAGAAGTTACTGCTCCAAAGCATAGTTCAGATGTCAGATATATTTCTCGAATGTCAACACCCACTACGTCCCAGAAACGACCTTTGAATGGCAATTCCAGACATAAAAGGGATGTATCGTCTAATTCGGATGGTTTCAGCTCAAGTTCAAAGCCATCGAGTAGTCCATTTCTTGGAGATGATGATGCAACACCTGCTTCATCTGATGATCTTATTACAGGGAATATGATGTTAAAATGTGTAAATTCAGGCAAGTTACATGATATCTGGGAAAGTTGTATGGGGAGGTGTCACTCTAAGACATTGAGGCAGCTGCTCCACAATCATGGAAAACTTGTATCTATTTGTGAAGTTGAAGGTGTTCTGGTTGCATATGTTGCATTCGGAGATAAAGATATTAAAATTAGGGCTGAAAGGTTTTTGAGCAGTATTACAAATTCAATGGAAATGGTACTCAGGTGCAATGTGGAGGTTCGAATTATTCACTTGCCAGATGGTAAAGGTGAAAATCTACCTGATATCATGCAAGCAGGATCAGCAATGGGAAGTGAGAGGCATAAAAAAGGAGACCATGCAAATGAAAAGGGTAGTCATTCTAGTTTTCCTCTGCTGGATGAAAACTCGCAGGCCATCATTGATTCATCAGATTTTACGGCTGGGAGAAACGGTGTGAGAGAGGATGAACAGGAAATTCCCACACAAAGAGTTGAATCTATTGTACATGAGCAGAGGCTGGAAACTGCGTGGCTACAGGCTGTAGAAAAAGGTTCTCCGGGATCATTGAATCATGCAAGACCTGAGAAAAATCAGGTCCTGCCTCGGGAAAATGTTATATGTAAAGACCCAGTAGAGTCCATTGATTCAACAAGATTTCCCTCTCAGCACTGGGAAGATGAACCTCGTCATGAAGGCAAAGTTTTGAAAGTTAAACATGGAAGAATCATACAAAATGGTCAGATTAGTAGAAATGGAGCTCGATGTCCCATGTCTCCAAGTTTATTGCATGGTAGCAGTTTAGCATCAAATTCCAACAAAGATAATCTGGGATATGAGTCAGGCTCCGGAGCTGGAGGTTGCATAGGACTTTTATGTTGGAATAACTGCAAGCGAAGAAGGGATAGAACACAAAAGGTTGGACATTGTACATTATTTAGTGACTGTGGTAAGTCAATGAAAAAGGAGGTGAAAAGGTAA 3702 0.426 MSERPVSDPSKLHLKKKDLTQIRKAARVLRDPGTTSSWKSPLSSSRSVTARSASASAWKNNFYRGKENSVSLRNWENYKSSGDKSRVAKNDDVEEENDGDGDGDGDGEDAVAACGGNDGSSSSLLGSFEDSLSDARGFDSKSDTCLRDERPSSIFRCGLTNHLSSARRKMGSVKRKSRKNNTYLDNLSKYRQPETNLGRKFVNSRTFLENSIEQSDDTEDYCNSEDLRRILGSSRLLLKLKRKNWSRSSPKLRRSSQTEDSSYTYSTPALSTCSYNRYGHYNSSTVGSWDVTTSSLNDGDDEVDDHLDLPRQRGCGIPCYWSKRTPKNRGICRTCCSPSLSETLRRKGSSLFCGSQTIYTRHRRSLSSSNKWRVSSRSAQGVLPLLSSSGDVRGGSSVGTGRSDDELSSNLRELYLEGLSRLDGRRWSSSCRSQDGLEIVPVDGEGDEEGTQENAMSFSQKYKPISFSDLIGQNIVVQSLMKAISRDRIAPIYLFQGPRGSGKTSTARIFAAALNCTAPDVSKPCGYCRNCTDLNSGKSRDFLEVDGNSKQGIDNVWYLLKRLSVGSPSASSRYTVCVIDECHLLPSKTWLAFLKFLEEPPSRVVFIFITTDLDNVPRRIQSRCQKYLFNKIKDGDIVGRLRTLSAEENLDVEKDALDLIAINADGSLQDAETMLEQLSLLGKRITASLVNELVGVVSDEKLLELLELAMSSDTSETVKRAREVMDSVADPIILISQMACLIMDIIAGSYTVIDAKPSDSYFGGRNLNESELGRLKHALKLLSEADKRLRTSSERSTWFTATLLQLGSMPSPDLTQSGSGRRQSCKTSEYDPSSASREVTAPKHSSDVRYISRMSTPTTSQKRPLNGNSRHKRDVSSNSDGFSSSSKPSSSPFLGDDDATPASSDDLITGNMMLKCVNSGKLHDIWESCMGRCHSKTLRQLLHNHGKLVSICEVEGVLVAYVAFGDKDIKIRAERFLSSITNSMEMVLRCNVEVRIIHLPDGKGENLPDIMQAGSAMGSERHKKGDHANEKGSHSSFPLLDENSQAIIDSSDFTAGRNGVREDEQEIPTQRVESIVHEQRLETAWLQAVEKGSPGSLNHARPEKNQVLPRENVICKDPVESIDSTRFPSQHWEDEPRHEGKVLKVKHGRIIQNGQISRNGARCPMSPSLLHGSSLASNSNKDNLGYESGSGAGGCIGLLCWNNCKRRRDRTQKVGHCTLFSDCGKSMKKEVKR 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1197 1233 CDD AAA 471 629 - -
Lele36g1197 1233 SMART AAA_5 489 651 IPR003593 -
Lele36g1197 1233 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 457 806 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lele36g1197 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 483 678 IPR027417 -
Lele36g1197 1233 MobiDBLite consensus disorder prediction 809 841 - -
Lele36g1197 1233 MobiDBLite consensus disorder prediction 809 905 - -
Lele36g1197 1233 FunFam DNA polymerase III subunit gamma/tau 453 631 - -
Lele36g1197 1233 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 459 844 - -
Lele36g1197 1233 MobiDBLite consensus disorder prediction 79 116 - -
Lele36g1197 1233 MobiDBLite consensus disorder prediction 385 405 - -
Lele36g1197 1233 MobiDBLite consensus disorder prediction 33 54 - -
Lele36g1197 1233 Pfam DNA polymerase III, delta subunit 472 632 - -
Lele36g1197 1233 MobiDBLite consensus disorder prediction 1015 1038 - -
Lele36g1197 1233 CDD HLD_clamp_pol_III_gamma_tau 632 695 IPR045085 -
Lele36g1197 1233 Gene3D - 448 630 IPR027417 -
Lele36g1197 1233 MobiDBLite consensus disorder prediction 26 54 - -
Lele36g1197 1233 MobiDBLite consensus disorder prediction 849 865 - -
Lele36g1197 1233 MobiDBLite consensus disorder prediction 878 897 - -
Lele36g1197 1233 FunFam DNA polymerase III subunit gamma/tau 633 695 - -
Lele36g1197 1233 MobiDBLite consensus disorder prediction 79 93 - -
Lele36g1197 1233 Gene3D - 634 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1197 Lele-ChrLele36 14450729 14456383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1197 460 676 Core DNA Replication Machinery Family AT1G63160 25.909 3.18e-11 64.3