Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1191 ATGGAACTTTCTAGTCAACAAGCAGAAATCCCAATGCCAAGAAACAGTACTACATATGGTGGGGAACATGGTAATGGCCATGGGCATGAGGGGCATGGGAACATGGCCCATCAACATCATCATCTCCACCAACACCAATACCCTTCTACTGGCTCCTCCATTACACAACAACCAGCCCTTCAAGATCCTCATCAGGACCATGGATCCTACATGATGAAGAAGAAAGAGGTAAGGTACAGAGAGTGCCTTAAGAATCATGCAGCTTCCATGGGAGGTACTGCCCTTGATGGCTGTGGTGAGTTCATGCCCAGTGGAGAAGAAGGCACCATAGAGGCCTTAACCTGCTCAGCTTGCCACTGTCACAGAAATTTCCACAGAAAAGAAGTAGAAGGTGAGCCTTCTTATTACAAATTTGGAAGCAAATTCGTCTTGGGACATCATCATCATCACAAGAGTATCTTAGCTTCCCCAGAAGCTCTTGTGGGGTACCCTACAGGCAACATTCTGCCTTCAAGAAGTGTACCACCACACCAGATGATACTGCCCTACAATGTAGGGCCTGGGCCAGTTCCTTCAGAAGATGAGCAAGAAGATGGAGTTGGTGGATTAATGGTGGGTAGGCCAGCATCCTCATCGCAGATAGTGAAGAAGAGGTTCAGGACAAAATTCACACAGGAGCAGAAGGAGAAGATGCTGAATTTTGCAGAGAAAGTTGGGTGGAAGATTCAGAAGCAGGAAGAATCTGTTCTGCAACAGATCTGTCAAGAGATTGGAGTCAGAAGAAGAGTGCTCAAGGTAGTAGTAGAATGTTCTCTGTCTGTAACAGCATGCAGAGAAGGCAACAGAGGTGGAGGAATAACCAAGAGCCATCTTGAAGAAGCAATTTCATCCACCAATCCATATCTTAAAATGAACAAGCTTTCATGCACAAGTTAA 936 0.4583 MELSSQQAEIPMPRNSTTYGGEHGNGHGHEGHGNMAHQHHHLHQHQYPSTGSSITQQPALQDPHQDHGSYMMKKKEVRYRECLKNHAASMGGTALDGCGEFMPSGEEGTIEALTCSACHCHRNFHRKEVEGEPSYYKFGSKFVLGHHHHHKSILASPEALVGYPTGNILPSRSVPPHQMILPYNVGPGPVPSEDEQEDGVGGLMVGRPASSSQIVKKRFRTKFTQEQKEKMLNFAEKVGWKIQKQEESVLQQICQEIGVRRRVLKVVVECSLSVTACREGNRGGGITKSHLEEAISSTNPYLKMNKLSCTS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1191 311 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 216 268 IPR006455 -
Lele36g1191 311 MobiDBLite consensus disorder prediction 46 67 - -
Lele36g1191 311 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 79 128 IPR006456 -
Lele36g1191 311 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 57 268 - -
Lele36g1191 311 Gene3D - 205 269 - -
Lele36g1191 311 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 78 129 IPR006456 -
Lele36g1191 311 Pfam ZF-HD protein dimerisation region 77 129 IPR006456 -
Lele36g1191 311 MobiDBLite consensus disorder prediction 1 22 - -
Lele36g1191 311 SUPERFAMILY Homeodomain-like 209 266 IPR009057 -
Lele36g1191 311 MobiDBLite consensus disorder prediction 46 63 - -
Lele36g1191 311 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1191 Lele-ChrLele36 14427661 14430005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1191 77 300 ZF-HD Transcription Factor Family AT2G02540 48.583 2.62e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele36g1191 ZF-HD_dimer 1.9e-29 No_clan