Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1179 ATGGATGATAGGGAGTCGAGGATTAGGATACAGGAGAATATGGAGGCGAGGGAACCCGAAAATGATGAGAAAGGAACGCTGAGAGAGCCACTTATTGTGAGCAGATACAGGGCGAACCACAGTTCCCAGATCGCCATTGTCGGAGCCAATGTCTGTTCCATTGAAAGTCTCCATTACGAGATTATTGAGAGTGACCTTTATATGCAAGATTTGAGATCTAGAACAAAGGTTGAGAAGTACCGTTATCTAGCCCTAAAATGGACACTTGCACTTCTTGTTGGTTTAGGCACAGGGCTTGTTGCCTTTTTTAATAACGTTGGAGTTGAGAATATTTCTGGTACCAAGCTTCTACTTACCGAAAAGCTCATGCTCAAAAGCAAGTTTCTTGAGGCCTTTGCAGTGTATGCTGGTTGTAATTTGATTTTGGCAATTGCTTCATCAGCCCTATGTGCTTATATTGCTCCTGCAGCTGCAGGCTCAGTCATACCTGAGGTGAAGGCATACCTCAATGGGGTAGATGCTTATTCTATACTCGCTCCCAGTACCCTCTTTATTTTTGGCTCAATTTTTGGGGTGGCCGCGGGATTTTTGGTGGGTAAGGAAGGACCTATGTACATACTGGCTCTTGCATTGCTAATTTACTTGGACAGGGTGGATCAAAAAAAGTGGAGAAGTGCTCTTCTGTGGCGGACTTTTTTTACAACAGGTGTAGTGGCTGTGGTATTGAGAGGCTTCATACAGTTATGCCGAGGTGGAAAATGTGGTCTTTTTGGGGAAGGAGGCTTGATAATGTTTGATGTTAGTTCAGAAATCCCTTCATATGAAATGCCTGACGTCTTCGCAGTAATGCTAATTGGAGTTATCGGGGGACTTTTGGGAAGCCTTTACAATTATCTAGTTCACAAATGCACAAAGTCCTTCAGAGGACTAAGGAGAGGCCCCAAAGTCAAAATTCTACTTGTGATCATTATCAACCTCTTGACATCTTGTGCTTCATACGGCCTTCCATGGCTATCTCGATGTGTCCCTTGTCCTCCTAACTTGGGGGACAAGTGTCCCACGGGAGGTCGCTCTGGAAATTACAAGAGTTTCCAATGTCCACCAAACCATTACAATGATCTTGCTTCTCTTTTTTTCTCTCCTAATGATGATACTATACGCAACCTATTAACATCAGGTTCTATCAAGGAATTTCAGATCTCTACTCTTATAACTTTCTTTGTGGTGATATACTTCCTTGGAATTATCACCTATGGCATTGCCATTCCCTCCGGCCTCTTCATTCCTGTCATTCTTGCTCGCCTTTTAAGTTCGTTCACTGTTCTTGATGTGGGTATGTTTGCACTCCTCGGAGCTGCATCGTTCCTTGGTGGTACCATGAGAATGACAGTTTCTATTTGTGTCATACTTCTTGAGCTCACTAATAACCTCTTGATACTCCCTTTGGTGATGCTAGTTCTACTTATATCAAAGACTGTGGCTGATAATTTTAACCTAGGTATTTACGATCAGATTGTGAAAATGAAGGGTTTGCCTTACTTAGAAGCAGTTGCAGAACCATACATGCGGCATTTAACAGCAGGAGATGTTGTTTCTGGCCCATTATTCACTTTTTCTGGGGTTGAAAAAGTGAGGGATATTGTTCATGCTTTGAGGGTAACACGACATCATGGTTTTCCTGTGATTAATGAGCGTCCATTCTCAGAAGCTCCTCAGTTGTGTGGACTGGTGTTTAGGTCTCATTTGCTTGTGCTTCTTAAACAGAGGAAGTTCACAAAGCAAAAGTTAATGGAGCTGAATTGA 1803 0.4276 MDDRESRIRIQENMEAREPENDEKGTLREPLIVSRYRANHSSQIAIVGANVCSIESLHYEIIESDLYMQDLRSRTKVEKYRYLALKWTLALLVGLGTGLVAFFNNVGVENISGTKLLLTEKLMLKSKFLEAFAVYAGCNLILAIASSALCAYIAPAAAGSVIPEVKAYLNGVDAYSILAPSTLFIFGSIFGVAAGFLVGKEGPMYILALALLIYLDRVDQKKWRSALLWRTFFTTGVVAVVLRGFIQLCRGGKCGLFGEGGLIMFDVSSEIPSYEMPDVFAVMLIGVIGGLLGSLYNYLVHKCTKSFRGLRRGPKVKILLVIIINLLTSCASYGLPWLSRCVPCPPNLGDKCPTGGRSGNYKSFQCPPNHYNDLASLFFSPNDDTIRNLLTSGSIKEFQISTLITFFVVIYFLGIITYGIAIPSGLFIPVILARLLSSFTVLDVGMFALLGAASFLGGTMRMTVSICVILLELTNNLLILPLVMLVLLISKTVADNFNLGIYDQIVKMKGLPYLEAVAEPYMRHLTAGDVVSGPLFTFSGVEKVRDIVHALRVTRHHGFPVINERPFSEAPQLCGLVFRSHLLVLLKQRKFTKQKLMELN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1179 600 MobiDBLite consensus disorder prediction 1 24 - -
Lele36g1179 600 Gene3D Clc chloride channel 84 214 - -
Lele36g1179 600 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 223 595 - -
Lele36g1179 600 SUPERFAMILY Clc chloride channel 65 516 IPR014743 -
Lele36g1179 600 SUPERFAMILY CBS-domain pair 519 591 IPR046342 -
Lele36g1179 600 Gene3D Clc chloride channel 215 515 - -
Lele36g1179 600 Pfam Voltage gated chloride channel 222 495 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele36g1179 600 Pfam Voltage gated chloride channel 143 208 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele36g1179 600 PRINTS Chloride channel signature 155 172 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele36g1179 600 PRINTS Chloride channel signature 445 461 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele36g1179 600 PRINTS Chloride channel signature 422 442 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele36g1179 600 PRINTS Chloride channel signature 501 515 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele36g1179 600 PRINTS Chloride channel signature 463 482 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1179 Lele-ChrLele36 14320816 14327151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1179 21 595 Ion Channels AT5G49890 61.129 0.0 716