Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1173 ATGGAGGTCTGCGTTCATGAGCAAGTGGATTTAGATGAGAGCGATGATGACCATGGCGTCATGAAATCACCCGCATTGCCCAGAAAGCATTCAAGTTTCAGTAGAGAGCGGAAGAATCGTCTGTTGAGCTCCGTCAGCTTTCAAGGATCAGGCAGAGTAATCACAAAAGATGATCAAAAAGAAATATTTAGTTCTGTTTTCGATACGTATGGCGAGAAAACTATAGATATGGGGAAATTGACTTTTCGTAGACGTGCGGCTATCATGGTGTTGATTACCACTGAATCTCGAAAGCAAACAAATGACAAAAGAACAATAACGATTGATCTGGCAATCAGTACAAACGATCATTTGTTGCCATGGAGAGTCTTTTGTCAAACTGTAGGCAATAATAAGCTTGTCTTTGCATCTAGTGCCCTCCTGGAAATTGTAGTACGCATAGTCCAAGAATGTGGTGGCCATCTTTTAGCCATTGTCCTTGTGGCAAAGTCATTGGAGAATGTGAAAGATGTCAAACTCTGGGAAGTAGCACTAAAAAAATTGTGCTGCCTTAATCCTCCTTATACTTGTAGAATGCTCTGTCTTAATCCAAGATCAACAAATGATAAGAATGTCCGATTGCCGGAGGACATAGCTATTTTGCATTCATTTAACACCATAAACCCCTTGTTCATGAAGAAATCTGGATTAGGGTTGACGGAGCCTCCAAAAGATAAGGAATGGCATAGTGTTGTACATAGGGAACTTGCAAACAGTAAACTATCTGAGCTGCCATCGTCTTCAAGCAGCCCTGAACTGAAAGTGTTAATGTTGCAGGGAAATGTTGATTTAACAAGAATCCCAAATACGTTTTTATTTAAAATGCCCTTGCTTACGATCCTGGACTTATCTTACACTAGTGTACGAGAACTATCGGACTCCCTTTTTGAGTTGGAGCAGCTCAGAGAAATCTGTTTGAAAGGTTGTGAATGTTTCCTGAAGTTATCACCAAAAATTGGGAAATTGAAGAAACTTGAGAAGCTTGATCTTGATGGAAATCAGATCATACATCTGCCAGAAGAGATTCAAGAGTTAACCAATCTCCAGAGCTTGTTCCTTTGCTTCTATGAATACCGTGTCAAAAAAGGCAAGCAACATACGTGGTCAACAATTATTCCATCTGAGGTAATCTCAAAACTCAAGGGGGTAAAACATTTAAGTATTGATGTGAGCCCGGATGATGAGCGGTGGTATGAGAATGTACAAGACCTTCTTCCAGAAATATTGGGATTAGAGCATTCGCTGACTCTTAGCTTATATATCCCGCATCTGGAACTTTTAAAGTTCATACCAGACCGAATGTTTCAGGTTGATTTTAAATTTATTGTTGGTAGGCATATGCAAAGGATCATATCAAGTACACCGTCCACATGTGAGGCAAAATTTAAACAGAGTGGTTGTAGCTTGAAGTTTGTAAATGGTGATCATGTCCCTGAAGAAATTAGAAGGCTTGTTAGGCACAGTAAGGCTTTGTTTCTGGAGCGACACAAGACAATCAAGAATCTGTCTGAATTTAACATGATGAATTTAGAACAGCTGAGAGTATGTACGTTGGCAGAATGCAGAGAAATGCAAACAGTTGTGGATGGAAGGAAATCAATTAGGGGTAATGATGTTTTCTCACATTTACTATATTTGTATATATCGCACATGAAGAGTGTATGGAAAGGGCCAATTCCACCTCGCTGCTTTTTCGGTATGCTGAAGTCTTTAGTATTGCAAAATTGCCCTGAGTTAACAACTGTCTTTACCATGGATTTTTTGGGCAATCTTTCACAATTAAAGGAGCTTATAGTGAAGAATTGTCCCAAAGTAACCACCTTGATAAATGATGGATCATTCAAACATAAAGGAGAGGGTGAGCCACTGCAGTCTTTCAGTGGCAAGATCTCCAAGGATATGAGGTCTATCACAACAAGTGGGATAGCAGGTGAGCCACTACAATCTTCCAGAAGCAAGGTCTCCAAGGATGAGCTTTTACACCTTCCTATGATGAGAGGAGTCATCCCAGGAAGGACAACGCAATCTGAGTCTTTGGATGATGGATATAGTTGGAGGAAATATGGCCAGAAAGACATTCCTGGAGCCAAATTTCCAAGAGGATATTACAGATGCACTCACAGAAATGTTCAATGTTGCCTAGCTAAAAAACAGGTGCAGAGAGATGACTGGCAGCCTTTCCTCTACCATATCACCTATCGTGGTCATCACACTTGCACACAAACCTCCGTTGTAACAAATTCCTCAATGAACAATCAGGTCGACTTCAGGACTCAATCTGGGGTTGATGATGACGATATTCACTATCATCCGGCGTTATGGCCTTCTAGTTCGAGGATCGTCACGGATCAAAAGCAAATTGGCAGCAGCAGGAGAAGCGACACTTGCACAGAAGCCTCCTGTGTGACAAATTCTACTCTAACTGACAGTATAAATCAGACCGGTAAGTCAGCATCCAATACAGATCTTGAGTTATCTTCTGCAGACTTTTGGAAAGAACCTTCCGTGAATGAAACATATGACTTCAGTTCTGAGACAGATCTTGAGTTTCCTTTTGAACCTTTTGCATCTTAA 2613 0.4072 MEVCVHEQVDLDESDDDHGVMKSPALPRKHSSFSRERKNRLLSSVSFQGSGRVITKDDQKEIFSSVFDTYGEKTIDMGKLTFRRRAAIMVLITTESRKQTNDKRTITIDLAISTNDHLLPWRVFCQTVGNNKLVFASSALLEIVVRIVQECGGHLLAIVLVAKSLENVKDVKLWEVALKKLCCLNPPYTCRMLCLNPRSTNDKNVRLPEDIAILHSFNTINPLFMKKSGLGLTEPPKDKEWHSVVHRELANSKLSELPSSSSSPELKVLMLQGNVDLTRIPNTFLFKMPLLTILDLSYTSVRELSDSLFELEQLREICLKGCECFLKLSPKIGKLKKLEKLDLDGNQIIHLPEEIQELTNLQSLFLCFYEYRVKKGKQHTWSTIIPSEVISKLKGVKHLSIDVSPDDERWYENVQDLLPEILGLEHSLTLSLYIPHLELLKFIPDRMFQVDFKFIVGRHMQRIISSTPSTCEAKFKQSGCSLKFVNGDHVPEEIRRLVRHSKALFLERHKTIKNLSEFNMMNLEQLRVCTLAECREMQTVVDGRKSIRGNDVFSHLLYLYISHMKSVWKGPIPPRCFFGMLKSLVLQNCPELTTVFTMDFLGNLSQLKELIVKNCPKVTTLINDGSFKHKGEGEPLQSFSGKISKDMRSITTSGIAGEPLQSSRSKVSKDELLHLPMMRGVIPGRTTQSESLDDGYSWRKYGQKDIPGAKFPRGYYRCTHRNVQCCLAKKQVQRDDWQPFLYHITYRGHHTCTQTSVVTNSSMNNQVDFRTQSGVDDDDIHYHPALWPSSSRIVTDQKQIGSSRRSDTCTEASCVTNSTLTDSINQTGKSASNTDLELSSADFWKEPSVNETYDFSSETDLEFPFEPFAS 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1173 870 ProSiteProfiles WRKY domain profile. 687 750 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele36g1173 870 Gene3D WRKY domain 681 755 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele36g1173 870 SUPERFAMILY L domain-like 227 623 - -
Lele36g1173 870 Gene3D Ribonuclease Inhibitor 201 423 IPR032675 -
Lele36g1173 870 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 663 831 IPR044810 GO:0003700
Lele36g1173 870 MobiDBLite consensus disorder prediction 9 37 - -
Lele36g1173 870 SMART LRR_typ_2 288 311 IPR003591 -
Lele36g1173 870 SMART LRR_typ_2 335 358 IPR003591 -
Lele36g1173 870 MobiDBLite consensus disorder prediction 9 32 - -
Lele36g1173 870 SUPERFAMILY WRKY DNA-binding domain 688 754 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele36g1173 870 Pfam WRKY DNA -binding domain 693 752 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele36g1173 870 ProSiteProfiles Leucine-rich repeat profile. 337 358 IPR001611 GO:0005515
Lele36g1173 870 Pfam Leucine rich repeat 264 322 IPR001611 GO:0005515
Lele36g1173 870 SMART WRKY_cls 692 754 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele36g1173 870 Gene3D - 120 187 IPR042197 -
Lele36g1173 870 Gene3D Ribonuclease Inhibitor 458 639 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1173 Lele-ChrLele36 14272647 14276774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1173 681 758 WRKY Transcription Factor Family AT5G24110 60.256 1.43e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele36g1173 WRKY 3.3e-22 CL0274