LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele36g1169	ATGGGCTCCTTATGCTCTAGAGGGACAAATTCACACAATTATGTCGCAGAAAACCATGTCCAGAAACCGAAGAAATCCTCAAAGGCAAAGAGAGATAAAAAACTTGCAATGCAAGAATGTAGTGGATCAAACGATGTTAATACAAGGTTGATATCTTCAGACGAGGGGGAGAAGAATGGTAAGACAACAGGGAAACCTGGGAATACTCAAATTAGAAGTGTAGAAGAAGGACCAAATAGAATGACGATGTTGAATAGGATAGGTAGTATAAAAAGAGGAGAAAGAGGAGCCCAAGTTCTTGCTGGGTGGCCTTCATGGTTATCTGCTGTTGCAGGAGAAGCCATTAGTGGTTGGATTCCACGTAGATCAGAATCCTTTGAGAAGTTAGAGAAGGTACTTCATTTCCTAATTCAATGGTGTGCAAACTGTCTTCTCATGCAAACCTTGGCCAAGGCCCTTGCAAGTCTATGTTGCTTGCCAGTGGAGCAACTGCATAAGATATTTAAGCTTTGTGGATCGCCTTCTGAGAAATACTGGAAGAAGTCGAAGTTACCACATGCCACCATTTTCAAACCTCGACATCCTTACAAGCGCGTTGTTGGAGAGACATTCAAGGATTTTCCAGCCTCTGCTCTCAAACTTCTCGATGTGCTTCTTGCTATTGAACCTGACGATCGAGGAACTGCTTCCTCAGCACTTCAGAGCGAGTTCTTCACGACAGAGCCGCTGCCTTCTGAGCCGTCGAGTTTGCCGAGGTATCCACCAAGTAAGGAGTTTAATGTGAAGCTTCGAGAAGAGGAAGCTAGAAGGAAAAAAGGGCCAACTAAGAAAGGAAATGAACAAGAACCCATCAAGAGTTCTGCAAACCCTAAAGCTGCCCCACCACCTGATTCTAAGTCCCACCTTTCAGCAAACACAGAGAATCGAGCAGGGGCAAAGGCAAAGCGTAGACTGGAGAAGAACGGGTTGCTGATTGAACCTGCAAGCACAAGAGGACCCAAAGTACTGTGTCATTCAGGCCAATCCACGGTGCAGAGCGCCTACATGAAAGTCATGAAGCATGAAGCTGCCGGAGGAGAACTCGAGGTGTTTATCGGAACCAGGAGAAAGCAGAGAGCATATTGGAATGCTGCCAACGCCGCCCGTCTCTCCAAGTTCTCTAACTCTGTCAATGCCGACGGCGCCTCCCGGCTCGACGTCATCGCGACTGCCGGAGGGAACTCCTCCGTGTGGGGAGGCGATGGCTTCGGCGAGAGGTATAGACATGCGGCCGCCGGAGAATCCGACCTCTTGATGCCTGCATCCCGCAAATCTTGTCTCAACAAACCTCTTTCTAAGAGAGGAGATGATTGTGTCTCATGGAAGCCCCCTCCAAAAGATGAATTCAGAGGGCATGGGCTTTGTGGAATGGCAGGTGTAGTGGATATGAGGCCTAATAAGTCCCATCAAGCTCTCAACTTCAAGCTTCTGAGTCTAGGGTTTTTGGTAGCATTTTTCTTCATCTTAGTTTTATGGCCAAAGTACTCTCCTTATTCTAACCAACAAGCCATGTCTCCAAGTAGTTCATCATCAAAAGCATCATCATCTTCTTCTCTAACCCTAAGATCTTCAAATGATGATGATGATCATGGCAGCGCGAAACAAGATTGTTCCCTTTCTTGCAACAAGATCCCTCCTTCATTAGCCAAAGCTCTCATCCACTACTCAACCTCAACCATAACCCCACAACAAACATCAAAAGAAATCTCAGTTTCAGCAAGAGTTTTAGAAAAGAAATCACCCTGCAACTTCCTAGTCTTTGGCCTGGGCCATGACAGCCTCGTGTGGAGCTCCCTCAACCACGGTGGCCGGACGGTTTTCCTAGAGGAAGATGAGGCTTGGATCGAGCAAATCCGGCGCCGGTTTCCCGGACTAGAGTCCTACCACGTGACCTATGACAGCAAAGTGAATGAAGCTGACAATTTGATGGAAGTAGGAAAAGGACCAGAATGTACAGCACTGGGAGATCCTAGGTATTCAACGTGCCGACTTGCATTGAAGGGATTGCCCAGTGAGGTCTATGAGATAAAATGGGATTTGATAATGGTGGATGCTCCAACTGGGTATTATGAAGAAGCTCCTGGGAGGATGACTGCTATATATACTGCTGGAATGATGGCTAGGAACAAAGAAAGTGGAGAAACTGATGTGTTTGTTCATGATGTGAATAGAGAGGTTGAAGACAAATTTTCTAGGGCTTTCTTGTGTGACAAGTATATGAAGAAACAAGAAGGAAGGTTAAGGCACTTCACAATTCCTAGTCACAGAGATGACCTGGATAAGCCATTTTGTCCTCGGGATTAA	2343	0.4635	MGSLCSRGTNSHNYVAENHVQKPKKSSKAKRDKKLAMQECSGSNDVNTRLISSDEGEKNGKTTGKPGNTQIRSVEEGPNRMTMLNRIGSIKRGERGAQVLAGWPSWLSAVAGEAISGWIPRRSESFEKLEKVLHFLIQWCANCLLMQTLAKALASLCCLPVEQLHKIFKLCGSPSEKYWKKSKLPHATIFKPRHPYKRVVGETFKDFPASALKLLDVLLAIEPDDRGTASSALQSEFFTTEPLPSEPSSLPRYPPSKEFNVKLREEEARRKKGPTKKGNEQEPIKSSANPKAAPPPDSKSHLSANTENRAGAKAKRRLEKNGLLIEPASTRGPKVLCHSGQSTVQSAYMKVMKHEAAGGELEVFIGTRRKQRAYWNAANAARLSKFSNSVNADGASRLDVIATAGGNSSVWGGDGFGERYRHAAAGESDLLMPASRKSCLNKPLSKRGDDCVSWKPPPKDEFRGHGLCGMAGVVDMRPNKSHQALNFKLLSLGFLVAFFFILVLWPKYSPYSNQQAMSPSSSSSKASSSSSLTLRSSNDDDDHGSAKQDCSLSCNKIPPSLAKALIHYSTSTITPQQTSKEISVSARVLEKKSPCNFLVFGLGHDSLVWSSLNHGGRTVFLEEDEAWIEQIRRRFPGLESYHVTYDSKVNEADNLMEVGKGPECTALGDPRYSTCRLALKGLPSEVYEIKWDLIMVDAPTGYYEEAPGRMTAIYTAGMMARNKESGETDVFVHDVNREVEDKFSRAFLCDKYMKKQEGRLRHFTIPSHRDDLDKPFCPRD	780

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele36g1169	780	MobiDBLite	consensus disorder prediction	265	279	-	-
	Lele36g1169	780	MobiDBLite	consensus disorder prediction	265	316	-	-
	Lele36g1169	780	MobiDBLite	consensus disorder prediction	516	551	-	-
	Lele36g1169	780	SUPERFAMILY	Protein kinase-like (PK-like)	139	244	IPR011009	-
	Lele36g1169	780	MobiDBLite	consensus disorder prediction	1	78	-	-
	Lele36g1169	780	MobiDBLite	consensus disorder prediction	1	17	-	-
	Lele36g1169	780	MobiDBLite	consensus disorder prediction	62	76	-	-
	Lele36g1169	780	TIGRFAM	A_thal_3515: uncharacterized plant-specific domain TIGR01627	556	777	IPR006514	GO:0045492
	Lele36g1169	780	MobiDBLite	consensus disorder prediction	516	535	-	-
	Lele36g1169	780	Pfam	Polysaccharide biosynthesis	580	763	IPR021148	-
	Lele36g1169	780	PANTHER	OS11G0490100 PROTEIN	486	779	IPR006514	GO:0045492
	Lele36g1169	780	Gene3D	Transferase(Phosphotransferase) domain 1	138	277	-	-
	Lele36g1169	780	MobiDBLite	consensus disorder prediction	238	257	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele36g1169	Lele-ChrLele36	14249036	14257340	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele36g1169	139	283	Core Cell Cycle Gene Families	AT5G10270	41.333	1.01e-24	107