Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1140 ATGAACCACATGATGTTTGGAATTAACATGAATTCCTTGGTGAATTTCAAACGACATGTCGTCTACAGGGAGTGTGTGCATAACCATGCAGCCTCACTTGGTGGAGTAGCCAGAGATGGTTGCTATGAATTTCTGCAACCTCGTCTTGTCGACGGTGGCTCACCAGAGGAGGCAATGCGTTGTGCAGTTTGCGGATGCCACCGAAACTATCACCGGAGACAGATTGTCCTTACTCCGCCCATGCCACCCCAAAGGCCACCTACAGTGGTTGCAAATGAGGGAAATGTCGTGGAGGGGCCGGTGGTGGAGGTGGCTTCACCGCCGTTGAGGAGGAGGAAGTGGAAGAGGACTAATTTCACGGAGGAGCAAAAGAGTCGAATGGCGAGTTTCGCAGAGATGTTGGGTTGGAGGGTTAAGAGAGCTGACAAGGAAGAGACTCTGAGAATTGACATGAATACTTCGGTGACTTTCAAACGACATGTCGGCTACAAAGAATGTCTGCATAACCATGCAGCCTCTTTCGGCTATGTAATTGGAGATGGTTGCCATGGAACTGAAACCGCGACTATCCCACCTCCAACCAAGCAACAACCAAACTCTCTGACGTCACCAGGTGCAGGCCCAATATCAGCTACAATGCCTGTTGTTGTTGACGAGGAAAATTCCGGCGGCAACGTCAATAATAACATTCTGGTGGTGCGCGCCACTGCCGAGGAGGAGGAGGAGGAGGAGAAAGAAGATGGCGAAGTTTGA 753 0.506 MNHMMFGINMNSLVNFKRHVVYRECVHNHAASLGGVARDGCYEFLQPRLVDGGSPEEAMRCAVCGCHRNYHRRQIVLTPPMPPQRPPTVVANEGNVVEGPVVEVASPPLRRRKWKRTNFTEEQKSRMASFAEMLGWRVKRADKEETLRIDMNTSVTFKRHVGYKECLHNHAASFGYVIGDGCHGTETATIPPPTKQQPNSLTSPGAGPISATMPVVVDEENSGGNVNNNILVVRATAEEEEEEEKEDGEV 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1140 250 MobiDBLite consensus disorder prediction 187 207 - -
Lele36g1140 250 Gene3D - 105 173 - -
Lele36g1140 250 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 74 IPR006456 -
Lele36g1140 250 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 22 74 IPR006456 -
Lele36g1140 250 MobiDBLite consensus disorder prediction 189 207 - -
Lele36g1140 250 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 158 183 - -
Lele36g1140 250 Pfam ZF-HD protein dimerisation region 20 75 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1140 Lele-ChrLele36 14014609 14017079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1140 20 178 ZF-HD Transcription Factor Family AT4G24660 34.254 1.09e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele36g1140 ZF-HD_dimer 1.6e-21 No_clan