LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele36g1139	ATGCCTAAACTTTCGACTTTCTTATTCTTCTCGGTCGTAGTCGTCATCGTCTTCGTCTCCATCTCACCTCTTTCCTATGGGTACGATCCACTGGACCCCAAGGGAAACATCACAATCACATGGGATTTCATAGCAGATAATGACGACACTTACGATGTGAGGGTATGGATACACAACTGGCAATTATATCGACACGTGGAGAAGCCGGGTTGGAGGCTAAGTTGGGCATGGAGAGGTGATGAGGTGATATGGAGCATGACAGGAGCAGAGGCAACGGAGCAAGGCAACTGTTCAAGGTTTAAGGGACAAAACAATCCACATTGCTGTGATAAGCAACCAACCATCATTGATCTTATGCCTGGCACTCCTTATAACAAGCAAGTTCCCAATTGTTGCAAACAAGGGATCCTATCATCTCTCACTCAAGATCCCACCCAAATTACTTCCATGTTCCAGATGAATTATAATAAGCCCTCTGTTCCAAACCCTAACAACATCACCGTGCCAGCTAATTTCAGCCTTGGAATCCCCGGTTACTCCTGTAGTGAACCTACTCAGGTCCCTCCTAGCAAATTCACCACCGATGGTCGTCGATGGACACAAGTTTTTGAAACATGGAATGTGACATGTATATACTCTCAATTCTTATCATCAACAGCCCCAAAATGTTGTGTGTCATTGTCTGCTTTCTACAGTGATACCATTGTTCCTTGCCCTAAATGCAGCTGTAATTGCCAAGGCCTACCAGGAGCATACTGTGTCAATTCCGATAAAGCTCCTTCATTGTTGAAACTGCCACAAGATGATAGCACACAAGATACAGAACCAGTGGTGAGGTGTTCACAGCACATGTGCCCTATAAGGATTCATTGGCATGTGAAGCAGAGCTATACAAAGTATTGGAGAGTGAAGATCACAATCACAAATTATAACTTTGTAAAGAACTATTCTCAGTGGAATCTTGTTCTCTTACACCCTAACTTGCAGAGTTTAACCCAAGTCTTCAGCTTCAACCACCAACCTCTCAAAATTTTTGGGGATATCAATGACACAGTGATGTTCTGGGGGGTAAAGTACTACAATGATATGTTGCTGACACATGGGGAGAATGGGAATGTGCAAACAGAGATGCTGCTTCACAAAGATGCTGGAATCTTCACATTTAATGGAGGATGGGGTTTTCCCAGAACTGTTTTATTTAATGGAGATGATTGTGTTATGCCCAGTCCTGATAATTACCCTACCCTCCCCAATACTGCTTCTTTTCCCTCCTCCTCTTCTTTCTTGCTTTTCTTATCTTTTATCTTCTCAATATTGTTGTGGTGA	1326	0.4314	MPKLSTFLFFSVVVVIVFVSISPLSYGYDPLDPKGNITITWDFIADNDDTYDVRVWIHNWQLYRHVEKPGWRLSWAWRGDEVIWSMTGAEATEQGNCSRFKGQNNPHCCDKQPTIIDLMPGTPYNKQVPNCCKQGILSSLTQDPTQITSMFQMNYNKPSVPNPNNITVPANFSLGIPGYSCSEPTQVPPSKFTTDGRRWTQVFETWNVTCIYSQFLSSTAPKCCVSLSAFYSDTIVPCPKCSCNCQGLPGAYCVNSDKAPSLLKLPQDDSTQDTEPVVRCSQHMCPIRIHWHVKQSYTKYWRVKITITNYNFVKNYSQWNLVLLHPNLQSLTQVFSFNHQPLKIFGDINDTVMFWGVKYYNDMLLTHGENGNVQTEMLLHKDAGIFTFNGGWGFPRTVLFNGDDCVMPSPDNYPTLPNTASFPSSSSFLLFLSFIFSILLW	441

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele36g1139	441	PIRSF	COBRA	3	441	IPR006918	GO:0010215\|GO:0016020
	Lele36g1139	441	Pfam	COBRA-like protein	51	213	IPR006918	GO:0010215\|GO:0016020
	Lele36g1139	441	PANTHER	PROTEIN COBRA	14	431	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele36g1139	Lele-ChrLele36	14004483	14008264	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele36g1139	5	440	COBRA Gene Family	AT3G02210	51.011	1.13e-162	464