Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1136 ATGGCCAAACACACAAACCTCCGGCTTATTGCCTACTCACAAGAGATTGTAGATGGACAGCCGATTTTTGTTTCTTCTAACTGTTTTCCTATTAAGGCTTCAAAGTTTGAGCCTGCAGGCCATGCCTTTCATTCAGCTGCCCTTAAACTTCTTGGTGTTGAGGAAGATAATGCAGATGGTGATGATATGAAGGTGGTTGATGATAAGGAACAGATGTACTCTGCATCATATGATTCTTATAGCAGCAAGAATAAGAAGAAATCTGGTGCTGGAGACAAGCAACAGGATCACTATGCATTATTGGGTTTGAGCCATCTAAGGTATCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCGTGAAACTGCCTTGAGGTATCATCCAGATAAACAGGCTGCTCTTCTGCTTGGTGAGGAGACTGAAGCTGCAAAACAGGCAAAGAAGGATGAAATAGAAAGTCATTTTAAGGCAATCCAGGAAGCATATGAAGTATTGATTGATCCAGTGAAGCGAAGAATATATGATTCCACTGATGAGTTTGATGATGAAATTCCCACTGATTGTTCTCCACAAGACTTCTTCAAAGTGTTTGGTCCTGCTTTCATGAGGAATGGACGGTGGTCAGTTACTCAACCAGTTCCGTCTTTAGGAGATGACAATACTCCACTAAAAGAAGTTGATGCATTCTATGATTTCTGGTATGCATTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGACAGAATGCAAAATTGTCAGAAAAAGCGAGGAAGGAAGAGTATTCTCGTATTCGTTCTCTTGTTGATAACGCTTATAAGAGAGACCCAAGAATACAGAGGAGAAAGGAAGAGGAAAAAGCTGAGAAGCAAAGGAAAAAAGAGTGTAAGATTCTTGCCAAAAAATTGCAGGAAGAAGAAGCCGCTAGAATTGCAGAAGAGGAGAAGAGACGGAAGGAGGAGGAGGAGAGACAAGCTGTAGAAGCTGCTTTACAACAAAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGGAAAGAGCGAACTCGTCTTCGAACACTTGCGGCACCCATCTTGTCACAGAGAACACGTGATATATCTGAGGATGATGTAGAAAGTCTTTGTCTGTCCCTTGATATTGAGAAGTTGAGGAATTTGTGCCAAATGATTGAAGGAAAACCCATCTCAGAGCAAGCAGAAATTCTAAGAGATGCTCATGGTTCTAAAAAAGATGCAGATGACCAGAAATCTGGGAAAACTGATAAAAAGGATGGTTCTGCAAGTGCTAATGGCAGTGCCTCACTAAGCTACACCAATGAGAAGAAGGAAAAACCTTGGAGCAAAGAAGAGATTGAGCTATTGAGAAAAGCAATGCAAAAATATCCTAAAGGAACTCCTCGGAGGTGGGAGGTCGTTTCAGAGTACATTGGTACGGGAAGATCTGTGGAAGAAATTTTGAAGGCAACAAAAACAGTTCTCCTCCAGAAGCCTGATTCTTCCAAATCATTTGATGCATTCCTTGAAAAAAGGAAACCTGCACCAACAATTGCATCTCCGCTTTCAACCCGAGAAGAATTAACTGGTGAATCAGCTCCTGGAAGGCCTGCAAACTGTGCTACCTCAGCAACAAACAACTCTGAAGAGTCTCAGGGCAAAATTACTTCAGACAAGCCAAGCTCTTCTGGTTCGGCAACTGCCAGCGGAGGTTCCTCTAGTTCTGATCAAGATGCGTGGTCCGCTGTTCAGGAAAAAGCACTGGTCCAGGCTCTGAAAGCTTTCCCCAAGGAAACTAACCAGAGATGGGAACGAGTTGCGGCTGCTGTTCCCGGTAAGACGGTGAATCAGTGCAAGAAAAAATTTACAATGTTGAAGGAGAACTTCAGAAGCAAGAAAAGTGCAGCTTAA 1953 0.427 MAKHTNLRLIAYSQEIVDGQPIFVSSNCFPIKASKFEPAGHAFHSAALKLLGVEEDNADGDDMKVVDDKEQMYSASYDSYSSKNKKKSGAGDKQQDHYALLGLSHLRYLATEDQIRKSYRETALRYHPDKQAALLLGEETEAAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCSPQDFFKVFGPAFMRNGRWSVTQPVPSLGDDNTPLKEVDAFYDFWYAFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEEYSRIRSLVDNAYKRDPRIQRRKEEEKAEKQRKKECKILAKKLQEEEAARIAEEEKRRKEEEERQAVEAALQQKKVKEKEKKLLRKERTRLRTLAAPILSQRTRDISEDDVESLCLSLDIEKLRNLCQMIEGKPISEQAEILRDAHGSKKDADDQKSGKTDKKDGSASANGSASLSYTNEKKEKPWSKEEIELLRKAMQKYPKGTPRRWEVVSEYIGTGRSVEEILKATKTVLLQKPDSSKSFDAFLEKRKPAPTIASPLSTREELTGESAPGRPANCATSATNNSEESQGKITSDKPSSSGSATASGGSSSSDQDAWSAVQEKALVQALKAFPKETNQRWERVAAAVPGKTVNQCKKKFTMLKENFRSKKSAA 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1136 650 FunFam Myb family transcription factor 588 648 - -
Lele36g1136 650 Pfam Myb-like DNA-binding domain 593 639 IPR001005 -
Lele36g1136 650 Pfam Myb-like DNA-binding domain 460 501 IPR001005 -
Lele36g1136 650 CDD SANT 461 501 IPR001005 -
Lele36g1136 650 ProSitePatterns Nt-dnaJ domain signature. 155 174 IPR018253 -
Lele36g1136 650 Pfam DnaJ domain 96 175 IPR001623 -
Lele36g1136 650 CDD DnaJ 96 167 IPR001623 -
Lele36g1136 650 MobiDBLite consensus disorder prediction 519 595 - -
Lele36g1136 650 Gene3D - 584 650 - -
Lele36g1136 650 CDD SANT 593 640 IPR001005 -
Lele36g1136 650 ProSiteProfiles Myb-like domain profile. 586 640 IPR001005 -
Lele36g1136 650 ProSiteProfiles dnaJ domain profile. 96 178 IPR001623 -
Lele36g1136 650 SMART sant 458 511 IPR001005 -
Lele36g1136 650 SMART sant 590 642 IPR001005 -
Lele36g1136 650 MobiDBLite consensus disorder prediction 421 462 - -
Lele36g1136 650 SUPERFAMILY Homeodomain-like 460 503 IPR009057 -
Lele36g1136 650 MobiDBLite consensus disorder prediction 440 456 - -
Lele36g1136 650 Gene3D DnaJ domain 92 209 IPR036869 -
Lele36g1136 650 MobiDBLite consensus disorder prediction 421 439 - -
Lele36g1136 650 Gene3D - 454 512 - -
Lele36g1136 650 MobiDBLite consensus disorder prediction 550 595 - -
Lele36g1136 650 Coils Coil 302 365 - -
Lele36g1136 650 SMART dnaj_3 95 170 IPR001623 -
Lele36g1136 650 ProSiteProfiles Myb-like domain profile. 454 509 IPR001005 -
Lele36g1136 650 SUPERFAMILY Homeodomain-like 592 646 IPR009057 -
Lele36g1136 650 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 2 649 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Lele36g1136 650 ProSiteProfiles SANT domain profile. 589 644 IPR017884 -
Lele36g1136 650 PRINTS DnaJ domain signature 150 170 IPR001623 -
Lele36g1136 650 PRINTS DnaJ domain signature 101 119 IPR001623 -
Lele36g1136 650 PRINTS DnaJ domain signature 119 134 IPR001623 -
Lele36g1136 650 SUPERFAMILY Chaperone J-domain 94 202 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1136 Lele-ChrLele36 13986368 13988320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1136 97 295 C2H2 Transcription Factor Family AT1G74250 29.412 5.01e-20 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele36g1136 DnaJ 5.3e-18 CL0392