Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1123 ATGAATGCGCAGGCTACAAAAATGAAGGCAGAGTATATACCACCAAAAGAAGAAGTTATCATGCAAGGTGAAGCAGCAGAAGATGTTTACATAATAGTGTCTGGAGAAGTAGAGATCATTGATTATGTAATGAGCAAAGAGAAAGTTTTAGGGATTTTACAAAGATGGGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAAGCCTCACAACTTTGCTTACAGAACCAAGACTCTCACACAGCTCTTGAGGCTCAAAACCAGTGATTTTACTGATACTATGCAGATTAAAAAGGAAGACAACAGACAACTGCTAGAAAATTTCCTTCAGCACTTGAAGAAGCTACATGATGTAAATGCAAGAGAATTGGTGATTGATTGGAGTAAAGATGACCCGAATATGGCAGTGAACTTGTTACATGTGGCCTCAACTGGCAATGCTGCTTTTCTTGAAGAGCTTTTGAAGGCTGGCTTGGATTCTAGTGTTGCTGACTCCAAAGGCAAAACCCCATTGGTATATATGTTCATATCTGCTATTCACAACCTTACAGACATACATACAAATTCATGCAATTCAAATTTGAACTTGCAGCTTAGTAAGAGTTCAGGGATACCTTAA 618 0.3867 MNAQATKMKAEYIPPKEEVIMQGEAAEDVYIIVSGEVEIIDYVMSKEKVLGILQRWDMFGEVGALCCKPHNFAYRTKTLTQLLRLKTSDFTDTMQIKKEDNRQLLENFLQHLKKLHDVNARELVIDWSKDDPNMAVNLLHVASTGNAAFLEELLKAGLDSSVADSKGKTPLVYMFISAIHNLTDIHTNSCNSNLNLQLSKSSGIP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1123 205 SUPERFAMILY cAMP-binding domain-like 5 117 IPR018490 -
Lele36g1123 205 SMART cnmp_10 1 109 IPR000595 -
Lele36g1123 205 FunFam Potassium channel KAT2 1 116 - -
Lele36g1123 205 PANTHER POTASSIUM CHANNEL AKT1 6 174 IPR045319 GO:0005249|GO:0006813
Lele36g1123 205 Pfam Cyclic nucleotide-binding domain 12 95 IPR000595 -
Lele36g1123 205 SUPERFAMILY Ankyrin repeat 117 173 IPR036770 -
Lele36g1123 205 CDD CAP_ED 5 105 IPR000595 -
Lele36g1123 205 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 19 35 IPR018488 -
Lele36g1123 205 Gene3D Jelly Rolls 1 96 IPR014710 -
Lele36g1123 205 Gene3D - 97 190 IPR036770 -
Lele36g1123 205 ProSiteProfiles cAMP/cGMP binding motif profile. 1 111 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1123 Lele-ChrLele36 13903680 13904409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1123 5 172 Ion Channels AT4G22200 58.960 1.01e-63 205