Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1104 ATGGTAATAGTTATCAAAAAACAAAAAAAAGTTGATGATGACTTCGGAAGTGGTCGCAAACGCTCTGAGGCTGCAGCGCGGAGAATAGTAGCCCTAGCCGAAACCCAAAAGGAGGCATCGCCACAGCAAAAAATGCCCAAGTCCAAACGCAATAAAACAGTCACACTCTCGAAGACAAAGAAAAAGGGGAGGGAACATAAAGAAGCAATAGTAAATGCTATAAAAGATGCTGCTGAAAAATACAGTTCAGTGTATGTGTTCTCTTTTGAAAACATGAGAAATAAGAAATTCAAGGAGTTCAGGGAGCAACTGAAATCTACTAGCAGGTTTTTCTTGGGATCAAACAAAGTCATGCAGGTGGCCCTAGGCCATTCTACTGCTGATGAGATTAGACCCGGTCTTCATAAGGTTTCTAAGCTTCTACGAGGAGATGCTGGAATGGTTTTTACAAATTTGGCAAAAGAAGAAGTTGAAAGGTTATTTAATGAGTTTGAGGAGTATGACTTTGCGAGAACAGGAAGCAATGCAACTGAAAAGGTGGAACTCAAAGAAGGTCCTTTGGAGCAGTTCACACATGAGATGGAGCCATTTCTGCGGAAGCAAGGCATGCCTGTTCGGTTAAATAAAGGAGTGGTTGAACTTGTCTCAGATTTTGTTGTTTGTGAGGAGGGGAAGCCGTTGTCACCTGAGGCATCTCGCGTAATGCGTCTACTGGGGATTCAGATGGCTACATTTAAACTTCATCTGATATGCAGATGGAGTCCTGACGATTTTGAACTGTACATACAAGGACCAGATGATTCAGACGTCGAAACCAATTAA 822 0.4221 MVIVIKKQKKVDDDFGSGRKRSEAAARRIVALAETQKEASPQQKMPKSKRNKTVTLSKTKKKGREHKEAIVNAIKDAAEKYSSVYVFSFENMRNKKFKEFREQLKSTSRFFLGSNKVMQVALGHSTADEIRPGLHKVSKLLRGDAGMVFTNLAKEEVERLFNEFEEYDFARTGSNATEKVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRVMRLLGIQMATFKLHLICRWSPDDFELYIQGPDDSDVETN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1104 273 MobiDBLite consensus disorder prediction 34 54 - -
Lele36g1104 273 FunFam Ribosome assembly factor mrt4 169 242 - -
Lele36g1104 273 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 45 264 - -
Lele36g1104 273 SUPERFAMILY Ribosomal protein L10-like 64 188 IPR043141 -
Lele36g1104 273 Pfam Ribosomal protein L10 63 164 IPR001790 -
Lele36g1104 273 MobiDBLite consensus disorder prediction 36 50 - -
Lele36g1104 273 Gene3D - 74 255 IPR043141 -
Lele36g1104 273 Pfam Insertion domain in 60S ribosomal protein L10P 170 240 IPR040637 -
Lele36g1104 273 FunFam Ribosome assembly factor mrt4 73 172 - -
Lele36g1104 273 CDD Ribosomal_P0_like 65 228 IPR033867 GO:0000027
Lele36g1104 273 Gene3D - 169 242 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1104 Lele-ChrLele36 13745795 13749877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1104 79 247 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 20.809 1.21e-08 53.1