Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1057 ATGGGGTTTGCAGGCATTTTTCTTGAACATGTTCTCCTTTCTGTTCTTCTTGTTGCAGAATTACTGAACAAACTTGTCATAGCTCAAGACAGTCCTGCTCTTGATGGTCTCAAGGCCACTTTCAATGACCCTTTTCTGAATAATAACTGGATTGGCTTCCCATGCAATGAGACTGATTCGACGAGATGGTTCGGGATTCAGTGTACGAGTGGTCGAGTCACCGGGATAGTACTGGAAGGTATGGGGCTAACTGGAAAAATCGATGTCAATGCATTCTTCAGCCTTACAGAATTGTCTGTTCTGAGCTTGAAAAGCAATTCCCTGAAGGGAAATGTGATGGATTTCTCCGACAATCATCACTTGAAGTACATTGATTTGTCTGGCAATGAGTTTGATGGGCCAATACCAAGATCCCTTCTGAATCTTAACCTCTTGGAAACATTGTTACTACAAGATAATAAGCTCACAGGTCCGATTCCGGAGTTCAGTCAACCGCGTTTGAAGATGATCAATGTGTCAGGCAATGATCTTCATGGCAGAATCCAAGTAACTCAAACTTTTCGATCACTGGGTCCTCCTTCTCTTAATTCCTTCAGCTCTAGCTTGAAAGCTTCAATTCCAACACCAACAGACAACCTAGAAAATGATGAGGCCCACAACCAGAATGAATCTTCAAATAAAGACAACACTTCCACTATTCTAATCATTTTCAATGTGGTTCTTCTGTTTGCAATAATCTTGCTAGGTTTTCTTTACTACAAGACAGCTAAAAAGCTCAACAACATTATGAAGCAACAGATTCCCATTAATAAAGACATGGTGGAGAGTACCGCTGACAAGGTCGAAATGAGATCTCGTCACAGTCCAGTAGAGATGGTCGTGGAAGAGAAGAAGGAGCTTATATTCTTTACGGATGAACCAAAGTTTCAAATGAATGAACTCTTAAAAGCATCTGCGGAGGCACTGGGTCAGGGAAACATGGGGAACAGTTATAAGGCTATGCTGGATGGAGGAGTTTCCATTGTTGTAAAGAGGCTAAGGGACTTGAAGCCAATGACAAGAGAGGACTTTGCAAACCAATTGCATGAAATTACGGATCTGAAGCATCCAAATTTGTTACCTTTGCTTGCTTACTACAATTCTAGAGATGAGAGGTTGCTGCTCTACAGGTATGCAGAGAAGGGAAATCTTTTCTTCAGGCTTCATGGAAACAGAAGTGGAAACCGGATTCCTTTCTCATGGAACTCAAGATTATCAGTGGCAAAAGGGGTAGCTCGAGGATTAACTTACCTTCATCTCAATGCCAAGCCCAACACCACCAGCATGGCTCCCCATGGAAACTTGAAGTCCTCAAATGTCCTGTTAGATGAAAACGACACAGTTCTCATCTCTGACTACGGACTTTCCACCCTCATAGCACAACCCATTGTAGCTCAACGCTTGGTCGTTTACAAATCCCCCGAATATGGGTACGCAAGAAAAGTATCAAAGCAATCTGATGTCTGGAGCTACGGAAGCCTTCTCATCGAACTTTTAACAGGCAGGTTATCTGCATGTTCAGCCCCACCTGGGGTAACCGGGTCGGATCTCTGTACTTGGGTCCACCGAGCAGTGAGGGAAGAATGGACGGCGGAGATATTCGATAAAGAAATTTCTACGCAGAGAAGTGCACTTCCTGGGATGCTGAGATTGCTTCAGATCGCTATGCGTTGCACCGATAGGTTCCCCGAGAATCGGCCGGATATGAGGGAGGTAGTGAGAGAAGTGGAGAAGATTGAAGTGGTTCCATTGATATCGGAAGATGAAGAAGATGTATCTGGAGATCGGTCTATAACAGATGATTCTCTCTACTCAACAAGCACTACTACCTCAGGGATTGTTGGAGATGACAGGTCGAGATGA 1902 0.438 MGFAGIFLEHVLLSVLLVAELLNKLVIAQDSPALDGLKATFNDPFLNNNWIGFPCNETDSTRWFGIQCTSGRVTGIVLEGMGLTGKIDVNAFFSLTELSVLSLKSNSLKGNVMDFSDNHHLKYIDLSGNEFDGPIPRSLLNLNLLETLLLQDNKLTGPIPEFSQPRLKMINVSGNDLHGRIQVTQTFRSLGPPSLNSFSSSLKASIPTPTDNLENDEAHNQNESSNKDNTSTILIIFNVVLLFAIILLGFLYYKTAKKLNNIMKQQIPINKDMVESTADKVEMRSRHSPVEMVVEEKKELIFFTDEPKFQMNELLKASAEALGQGNMGNSYKAMLDGGVSIVVKRLRDLKPMTREDFANQLHEITDLKHPNLLPLLAYYNSRDERLLLYRYAEKGNLFFRLHGNRSGNRIPFSWNSRLSVAKGVARGLTYLHLNAKPNTTSMAPHGNLKSSNVLLDENDTVLISDYGLSTLIAQPIVAQRLVVYKSPEYGYARKVSKQSDVWSYGSLLIELLTGRLSACSAPPGVTGSDLCTWVHRAVREEWTAEIFDKEISTQRSALPGMLRLLQIAMRCTDRFPENRPDMREVVREVEKIEVVPLISEDEEDVSGDRSITDDSLYSTSTTTSGIVGDDRSR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1057 633 SMART serkin_6 316 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g1057 633 Gene3D Ribonuclease Inhibitor 29 213 IPR032675 -
Lele36g1057 633 SUPERFAMILY Protein kinase-like (PK-like) 320 595 IPR011009 -
Lele36g1057 633 Gene3D Transferase(Phosphotransferase) domain 1 393 607 - -
Lele36g1057 633 MobiDBLite consensus disorder prediction 200 226 - -
Lele36g1057 633 SUPERFAMILY L domain-like 49 195 - -
Lele36g1057 633 Pfam Protein tyrosine and serine/threonine kinase 320 588 IPR001245 GO:0004672|GO:0006468
Lele36g1057 633 MobiDBLite consensus disorder prediction 200 215 - -
Lele36g1057 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 593 - -
Lele36g1057 633 MobiDBLite consensus disorder prediction 611 633 - -
Lele36g1057 633 Gene3D Phosphorylase Kinase; domain 1 280 391 - -
Lele36g1057 633 MobiDBLite consensus disorder prediction 600 633 - -
Lele36g1057 633 ProSiteProfiles Protein kinase domain profile. 316 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1057 Lele-ChrLele36 13322105 13324694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1057 44 592 Receptor kinase-like Gene Family AT3G02880 35.343 3.08e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele36g1057 PK_Tyr_Ser-Thr 6.8e-29 CL0016