Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1033 ATGGGCCATAAGAACTCAAGAGTGAAGGCGCGCTTTAGGAGGGGTAGACGCTCTTATTGGGAGAGTTTTGCGGCTGGAGCAAGTGGGGTTTACACCATGAAGTTCAACATTGCAAATCCCACCACTGGATGCCAGAAGAAGCTGGAGATCGATGACGATCAGAAGCTACGAGCTTTTTGGGACAAGCGTATCTCACAGGAGGTTAGCGGTGATGCTTTGGGTGAGGAATTCAAAGGCTATGTCTTCAAGATCACTGGTGGCTGTGATAAACAAGGTTTCCCAATGAAGCAAGGAGTGCTGACCCCTGGTCGTGTTCGTCTCTTGCTCCACAGAGGAACTCCTTGCTTCCGAGGATATGGAAGGCGTAATGGAGAACGCAGGAGAAAGTCTGTGCGTGGGTGCATTGTGAGTCCAGATCTCTCTGTTCTGAACTTGGTAATTGTGAAGAAGGGTGAAAATGATTTGCCTGGACTCACCGACATTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCATCCAAAATCCGCAAGCTGTTTAACCTTTCCAAGGAGGATGATGTGAGGAAGTATGTCAACACTTATCGTCGTTCCTTCACAACAAAATCTGGCAAAAAGGTGAGCAAGGCTCCTAAGATACAGAGATTGGTCACACCTTTGACCCTCCAAAGAAAGCGTGCAAGAATTGCACAGAAGAAGAAGAGAATTGCCAAGGCCAAGTCAGAAGCAGCCGAGTACCAGAAACTTCTTGCCTCAAGGTTGAAGGAACAGAGGGAGCGTAGAAGCGAGAGTTTGGCCAAGAGGAGGTCCAAGCTCTCTACCGCTAGGCAATCCGTGGCAGCATAG 843 0.4887 MGHKNSRVKARFRRGRRSYWESFAAGASGVYTMKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKIQRLVTPLTLQRKRARIAQKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSTARQSVAA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1033 280 PIRSF RPS6e 33 280 IPR014401 GO:0003735|GO:0005840|GO:0006412
Lele36g1033 280 PANTHER 40S RIBOSOMAL PROTEIN S6 33 272 IPR001377 GO:0003735|GO:0005840|GO:0006412
Lele36g1033 280 MobiDBLite consensus disorder prediction 251 280 - -
Lele36g1033 280 MobiDBLite consensus disorder prediction 251 269 - -
Lele36g1033 280 Gene3D - 165 266 - -
Lele36g1033 280 Coils Coil 221 248 - -
Lele36g1033 280 ProSitePatterns Ribosomal protein S6e signature. 84 95 IPR018282 GO:0003735|GO:0005840|GO:0006412
Lele36g1033 280 SMART Ribosomal_S6e_2 33 160 IPR001377 GO:0003735|GO:0005840|GO:0006412
Lele36g1033 280 Pfam Ribosomal protein S6e 33 160 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1033 Lele-ChrLele36 13098437 13101310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1033 33 274 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 72.727 6.72e-119 337