Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1013 ATGAGTTCATTTGAAATGCCAACTGGGTGGAGATTTTGTCCCGAAGATATTGAACTCATTAGAGATTATCTTTATAAGAAAGTGATGGGACAAGAATTACCTATGGAACGTGTAATCGTTGAGTGCGATCTTTATGGTAATGAGAATCCATGGCAAATCTGGGAACGTTTCAGTGAATATGTAGTTAAGTCATTTCAATGCGAAGATCTCTATGTCTTCACAAAACTAAAGAAGAAGAACCCTGAAGCTAGGAATGTGGAGAGGAAGGTGGGATTAGGGTCTTGGGAAGGGGAAGCTCTGGCAAAAAGGATCGCAATCAATAGTTATAATAACATTGATGGAACTATCAATCAATCTGTGGTTGGATTCATGAAGAGGTTCCGGTTTGAGAAAAGCGGAACTGATCAAGATGGCAAATGGATTATGCACGAGTATTCTCTTAATCCTTCGCTGTTTACTTCTCACTGGCAGATAAAAGATTACGTTGTCTGTCGGATAAGAAAAAATGATAGAACTGTTAAACTACAAAAGAAAAGAAAAGAGCGTGAAGAAAAACAACAAAAATATTATGAAGAGCAAAAAGGAAATCCAAGAAACAAGAAGACAAGAACAGAACCAACAGAAAATATTCAAAAACAAATTTGTGAACAAAACAACGATAATCAAATAATTCCTCAGGCCAAGTGCAAAGAAGAGACCAACATGTCCATGGATAATTTCTGTTCGTGGTTAGAAACAAACTTAAGTTGTGATCAACAAGAAAATAATGAAGGAAACAAAGATAATCAAATAATTCTATCAGACAATAAGAGCAAGGAAGAAGAGCCTTCCATGGATGATTTCTGTTCGTGGTTAGAGAAAAACTTAAGTTCTGATCAAGAAGAAAAGAATGAAGGAAACAAAGATAATCAAATAATTCCAGCAATCAATAAGAGCAAGGAAGAAGATCCTTCCATGGATGATTTCTGTTCATGGTTAGAGAAAAACTTAAGGCTAGGAGAAGAAGAATGGCAGAAGATGTTGCAGCTGTGA 1032 0.3605 MSSFEMPTGWRFCPEDIELIRDYLYKKVMGQELPMERVIVECDLYGNENPWQIWERFSEYVVKSFQCEDLYVFTKLKKKNPEARNVERKVGLGSWEGEALAKRIAINSYNNIDGTINQSVVGFMKRFRFEKSGTDQDGKWIMHEYSLNPSLFTSHWQIKDYVVCRIRKNDRTVKLQKKRKEREEKQQKYYEEQKGNPRNKKTRTEPTENIQKQICEQNNDNQIIPQAKCKEETNMSMDNFCSWLETNLSCDQQENNEGNKDNQIILSDNKSKEEEPSMDDFCSWLEKNLSSDQEEKNEGNKDNQIIPAINKSKEEDPSMDDFCSWLEKNLRLGEEEWQKMLQL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1013 343 MobiDBLite consensus disorder prediction 174 207 - -
Lele36g1013 343 MobiDBLite consensus disorder prediction 254 319 - -
Lele36g1013 343 MobiDBLite consensus disorder prediction 174 208 - -
Lele36g1013 343 SUPERFAMILY NAC domain 3 168 IPR036093 GO:0003677|GO:0006355
Lele36g1013 343 Pfam No apical meristem (NAM) protein 7 147 IPR003441 GO:0003677|GO:0006355
Lele36g1013 343 ProSiteProfiles NAC domain profile. 6 169 IPR003441 GO:0003677|GO:0006355
Lele36g1013 343 PANTHER NAC TRANSCRIPTION FACTOR 56 6 232 - -
Lele36g1013 343 MobiDBLite consensus disorder prediction 266 281 - -
Lele36g1013 343 Gene3D NAC domain 16 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1013 Lele-ChrLele36 12932909 12935853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1013 6 184 NAC Transcription Factor Family AT3G04070 28.718 6.75e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele36g1013 NAM 2.6e-22 No_clan