Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1009 ATGGACAATAGTGGCAGCAGAGCCGAAGCCGAACGGTGGCTCTACACCGCCAATAAGCTCCTCAGCGCACGTGATCTGCACGGGGCTAGGTCTTTCGCCGTTCGGGCGCGCGAGTCCGATCCCACATTTGACGCCTCTGAGTTGCTTCTCGCCGTCATCGACACCCTCCTCGCCGGTGAGACTCAGATCAATGGCCTCCATGATTGGTATAGCATCCTCCAGATTCTGCCTTACACTCACAACATCGAGTACATCGCTTCCCAGTATCGTCGTCTCGCTCTCCTCCTTGACCCTCACCGTAACCCTTTTGCGTTTTCTAGCCATGCGTTCACGCTCGTTCATGACGCGTGGTCTGTACTCTCCAATCCTGCTAAGAAGGCTATGTACGACAACGAGCTGCGATTGGTCACCGCCCCTCCTCCTGCGGCTCCTCCCCCGCAGCCTGTTCCGGTGGCAACGGTTCAAGCGCCGAACCCGGTTCAGGCTCCAAACTCAACTCTGACACTGAATCCACCCTCCTTCCAGCGGCAACAGCAACCGCAGCGAAGTCCGGCGAAGAGGGGCCCGAAGCCGAAAGACAGGACGGGTGCTGGGGAACAAAGGCCAATCCCTAACATTGCTGCGACGGAGGAAACCCCGCAGGCCCGGACGAGGGAGCCGGTGGACTCTGAAACGGGCTCGAGTTTCTGGACGGCGTGCCCATACTGTTACGTTATGTATGAGTACCCAACGTTGTACGAGGACTGTACCCTAAGGTGCCAGAGCTGTAGAAGGGGATTTCATGCTGGGAAGTTACGGACGCCGCCGATGGCGGGGAAAGATTCGTATTATTGCTGCTGGGGGTTTTTCCCGTTAGGGTTTTCAGGGGATTTCAAAGACATAAGTGGGACTAATTCCAAGTGGAACCCATTTTCTGCAATGTTTGCATGCCCTTTGAAAGGAGGAGGAGCTAACAGGGCATCTCAGAGAGGACCTTGGGTTTATCATGATGATGAAGCTGCTGCTGCATTCATGGAACTTTCTGATCCAAGTGATGATGATTCAGACGATGCTGATTGGGGAGCGAGGAACAAGAGGGCGAAGAAGAGGGCTAAGATCAAAGCAAAAGCATCTGGTAATGCTAGTGGTGATTCTAGAAGGGCATTTTCTGAAAGAACTAGGAGAAAGAGCCAGAGTGGGTCAGGACACGCCAATTTAGAAAATGGTGTGGTTGGAGACGGTGGCTCTGGCGTGCCTAATGCTGCGAGGGCGGAATTGAGTAAAAAAGCTGCGAATAGCTCGAGAAGAAGGGGTGCAGGGAACCTGGGGAAGTTGGATTTGAATGTGGAGTTTAGTAATGAGGTGGAAGAGCCATTCCCGGCAGTGAGAGATGGTAATGTGGCTGGAAATCCTGAGGAGAATATAGAAGGGAATGCATTTTTTGAAGGTCTTGATGAATTCCTTAATAGCTTGCCCATCCTCAATGTCGTGGCAGATGACAAGGTTAAGGGTCACTAG 1497 0.5311 MDNSGSRAEAERWLYTANKLLSARDLHGARSFAVRARESDPTFDASELLLAVIDTLLAGETQINGLHDWYSILQILPYTHNIEYIASQYRRLALLLDPHRNPFAFSSHAFTLVHDAWSVLSNPAKKAMYDNELRLVTAPPPAAPPPQPVPVATVQAPNPVQAPNSTLTLNPPSFQRQQQPQRSPAKRGPKPKDRTGAGEQRPIPNIAATEETPQARTREPVDSETGSSFWTACPYCYVMYEYPTLYEDCTLRCQSCRRGFHAGKLRTPPMAGKDSYYCCWGFFPLGFSGDFKDISGTNSKWNPFSAMFACPLKGGGANRASQRGPWVYHDDEAAAAFMELSDPSDDDSDDADWGARNKRAKKRAKIKAKASGNASGDSRRAFSERTRRKSQSGSGHANLENGVVGDGGSGVPNAARAELSKKAANSSRRRGAGNLGKLDLNVEFSNEVEEPFPAVRDGNVAGNPEENIEGNAFFEGLDEFLNSLPILNVVADDKVKGH 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1009 498 CDD PHD_SF 233 278 - -
Lele36g1009 498 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Lele36g1009 498 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 378 - -
Lele36g1009 498 MobiDBLite consensus disorder prediction 157 184 - -
Lele36g1009 498 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Lele36g1009 498 MobiDBLite consensus disorder prediction 138 153 - -
Lele36g1009 498 MobiDBLite consensus disorder prediction 340 413 - -
Lele36g1009 498 CDD DnaJ 68 122 IPR001623 -
Lele36g1009 498 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
Lele36g1009 498 SMART dnaj_3 67 125 IPR001623 -
Lele36g1009 498 Gene3D DnaJ domain 65 138 IPR036869 -
Lele36g1009 498 MobiDBLite consensus disorder prediction 138 223 - -
Lele36g1009 498 Pfam DnaJ domain 68 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1009 Lele-ChrLele36 12898234 12899730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1009 9 497 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.604 1.01e-97 301