Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0994 ATGGTAAGGAGACCTTTAGCGCCTCTCTCCTCTGTCTTGCTGCCGTGGTTTAGCTTCTGCCACAGTTTGATGTGCCCCGTTGCTTTGTCTGAATATTGTCACAGCTTTTGGTATCTGGGTTTTGCTATTTTGATGTTGGTTCTCATGGACAACACAAGTGAAAATACATTAAAAGAAACTCTGCGCAAATATGAAGTTAAGGAAGACCAAACTTTTGAAGAGTTAGGACTGGATGCACGAATAATTCATGCCTTACTCAAAAAGGGAGTCGAGAAACCAACTCCAATTCAACAGGTGGCCATTCCACTCATATTGGAAGGTAAGGATGTGGTTGCTCGAGCAAAGACAGGTTCTGGCAAGACATTTGCATACCTTCTTCCATTGCTCCAAAAATTGTTCACTAATACTGTTCAAAGAAAGAGGCTATCACCCAATGCATTCATTCTTGTGCCAACTCGAGAACTATGTCAACAGGTATATGCAGAGGTTTCATCTCTCATAGAATTATGCAGAGTTCAACTGAAAGCTGTGCAATTGACAAGCAATATGAAGGCTTCTGATCTGCGGACAGCAATGACTGGACCACCTGATGTTTTGATTTCCACACCTGCTTGTATTGCTAAATGCTTGTCCACTGGCATACTTAAATCAGCATCCTTTAATGGTTCCCTTGAAACTCTAGTTCTTGATGAGGCAGATCTTCTATTGTCATACGGCTATGAAAATGATATAAAAGCCTTTTCAGCTCATGTACCCAGAAGTTGCCAGTGTCTTCTTATGTCCGCAACATCAAGTGCTGATGTTGACAAACTAAAGAAGTTGATGCTGCACAACCCCTTTATTTTGACTTTGCCTGAACTAGGAAATCAGAAGGATGAGATTATCCCTAAAAACGTTCAACAATTTTGGATCTCATGCCCTGCCAATGATAAGTTGCTTTACGTCCTTGCCTTGTTGAAGTTAGAGTTGGTCCAAAAGAAAGTTCTAATATTTACCAATACCATAGACATGAGTTTCAGATTGAAACTGTTCTTGGAAAAGTTTGGAATCAAGTCTGCTGTGTTAAATGCCGAGTTGCCACAAAATTCCCGTCTCCATATTCTTGAGGAATTCAATGCTGGCCTCTTTGATTATCTTATTGCAACTGATGACAGCCACATAAAGGAGAAGGGTGAAGCAACTAAAGAAAATAATGGTGAGTTGCGGCAATCCAAAAAACACGTCAAGCAAAAATTAGATTCTGAATTTGGAGTTGTGAGGGGAATCGACTTTAAAAATGTATACACGGTTATAAACTTTGAAATGCCTCAAAGTGTTGCAGGATACGTCCATCGAATAGGACGTACTGGAAGAGCATACAATTATGGTTCTTCTGTATCTTTGGTTTCTACTGATGAGATGAAAACTTTAGATGAAATAAGATCTTTTGTTGGGGATGATGAAAACAATGGTTCAAACACAATTGCTGAATTTCCATTGCTTACCAAGAATGCTGTGGAATCTATCCGGTATCGGGCTGAGGATGTTGCAAAGAGCGTAACAAAAATTGCAGTTCGTGAATCACGAGCCAAGGACTTGAGGAATGAAATTCTAAACTCTGAAAAATTGAAGGCACACTTTGAATCTAATCCAAGGGACCTAGACCTATTGAAGCATGACAAAGTTTTGAGCAAAAATGCCCCTCCGGCACACCTACGTGATGTGCCAGACTATTTAGTAGATAAACCAACCAAAGAGGCAAGGGAAATGGTCAAGCTTGCAAGGGATGCAATGGGAAATAATAATCGTTCACGAGGATCAAAAAGGAAAAGGACCAGAAAAGGTGGAGACCCTCTCAAGGCTATATCTGCCAAGGTGTCAAAAAGACCACACAAAGTGGATGGACATAAACGCAGGAAGAAAAATGAAGTTTGA 1914 0.4039 MVRRPLAPLSSVLLPWFSFCHSLMCPVALSEYCHSFWYLGFAILMLVLMDNTSENTLKETLRKYEVKEDQTFEELGLDARIIHALLKKGVEKPTPIQQVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTNTVQRKRLSPNAFILVPTRELCQQVYAEVSSLIELCRVQLKAVQLTSNMKASDLRTAMTGPPDVLISTPACIAKCLSTGILKSASFNGSLETLVLDEADLLLSYGYENDIKAFSAHVPRSCQCLLMSATSSADVDKLKKLMLHNPFILTLPELGNQKDEIIPKNVQQFWISCPANDKLLYVLALLKLELVQKKVLIFTNTIDMSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDDSHIKEKGEATKENNGELRQSKKHVKQKLDSEFGVVRGIDFKNVYTVINFEMPQSVAGYVHRIGRTGRAYNYGSSVSLVSTDEMKTLDEIRSFVGDDENNGSNTIAEFPLLTKNAVESIRYRAEDVAKSVTKIAVRESRAKDLRNEILNSEKLKAHFESNPRDLDLLKHDKVLSKNAPPAHLRDVPDYLVDKPTKEAREMVKLARDAMGNNNRSRGSKRKRTRKGGDPLKAISAKVSKRPHKVDGHKRRKKNEV 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0994 637 Pfam Helicase conserved C-terminal domain 310 453 IPR001650 -
Lele36g0994 637 Pfam DEAD/DEAH box helicase 94 271 IPR011545 GO:0003676|GO:0005524
Lele36g0994 637 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 317 499 IPR001650 -
Lele36g0994 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 294 478 IPR027417 -
Lele36g0994 637 SMART ultradead3 89 302 IPR014001 -
Lele36g0994 637 SMART helicmild6 339 453 IPR001650 -
Lele36g0994 637 Coils Coil 523 543 - -
Lele36g0994 637 CDD SF2_C_DEAD 299 462 - -
Lele36g0994 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 283 IPR027417 -
Lele36g0994 637 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 70 98 IPR014014 GO:0003724
Lele36g0994 637 CDD DEADc_DDX56 77 284 - -
Lele36g0994 637 Gene3D - 287 491 IPR027417 -
Lele36g0994 637 PANTHER RNA HELICASE 59 575 - -
Lele36g0994 637 MobiDBLite consensus disorder prediction 587 637 - -
Lele36g0994 637 Gene3D - 48 284 IPR027417 -
Lele36g0994 637 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 101 282 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0994 Lele-ChrLele36 12578619 12584876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0994 71 493 Eukaryotic Initiation Factors Gene Family AT3G19760 25.768 7.06e-38 143