Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0990 ATGATTGATGTAGCATCTGCATTGGAGTATCTTCATCATGGTTCTTCTACACCAGTGGTCCATTGTGACGTAAAGCCGAGCAATGTTTTATTGAATGAAAATATGGTGGCCCATTTGAGTGATTTTGGAATCTCTAAATTGTTAAGTGATAGCAAATCAGAAATTTATACTAAAACTTTAGCTACGGTTGGTTATATGGCACCAGAGTATGGATCAAGAGGAACTATTTCAATGAGCGCAGATGGGAAGAATTCCGTCTTGGAGAGAAACTATCCTGAAGAACTGTCAAATCGTTTCCCACGAAAATTTTCTTGGAAACCTCGAGAAAATGTGAGGAAGTTTTGTTTGGCGAATCGGAAATTAGCGTTCTTCGTTTCATCTGAGAAAGCTCACGAAATGCCTAGAAACGGCGAGGAAGAAAGGGATCCCGGACCTTCGTCGAACACCCGCGTCAGAGCCAGACCGGATCCTTTCTTGGTAGCGTGTAGGTGCTTCAGTTTGTTGACCTGTTTGGCTGCCATCCTTTGCATCGCCGTCAATATCCTCTCTGCTGTGCGCTCCTTCAAGAACGGATCTGATGTTTTCGATGGCATATTCCGGTGTTATGCTGTATTGATAGCTTTTGTTGTGGTTGTGGCCGAGACAGAATGGAGTTTCATAACCAAGTTCTGGCAGGTTTTGGGATACTGGGCTGGCAGGGGTATGCTCCAGATTTTTGTTGCAGTAATGACAAGGGCTTTCCCTGATTATCTTGGGGAGAGAAAGGATCTTGTTCTTCTTCAGAATATATCATGCTATTTGCTTCTTGCTTGTGGTGTAGTTTATGTTGTCTCGGGAATACTATGCATTGGTTTTCTGAAACGTACCCGCCAGCAGCAGCAAATCACAAGAGAGCAAGCAATCAAGGATCTAGAGGAGTTGCAACAGCGTAAAGAGGAGCTTGAACAACTGCTTCTCCCAGAAAGTGTTTGA 972 0.4372 MIDVASALEYLHHGSSTPVVHCDVKPSNVLLNENMVAHLSDFGISKLLSDSKSEIYTKTLATVGYMAPEYGSRGTISMSADGKNSVLERNYPEELSNRFPRKFSWKPRENVRKFCLANRKLAFFVSSEKAHEMPRNGEEERDPGPSSNTRVRARPDPFLVACRCFSLLTCLAAILCIAVNILSAVRSFKNGSDVFDGIFRCYAVLIAFVVVVAETEWSFITKFWQVLGYWAGRGMLQIFVAVMTRAFPDYLGERKDLVLLQNISCYLLLACGVVYVVSGILCIGFLKRTRQQQQITREQAIKDLEELQQRKEELEQLLLPESV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0990 323 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0990 323 SUPERFAMILY Protein kinase-like (PK-like) 1 81 IPR011009 -
Lele36g0990 323 Pfam COPI associated protein 170 293 IPR013714 -
Lele36g0990 323 Coils Coil 290 317 - -
Lele36g0990 323 Gene3D Transferase(Phosphotransferase) domain 1 1 82 - -
Lele36g0990 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Lele36g0990 323 Pfam Protein kinase domain 2 71 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0990 323 PANTHER OS07G0118300 PROTEIN 139 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0990 Lele-ChrLele36 12547963 12552777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0990 2 81 Receptor kinase-like Gene Family AT5G20480 48.837 1.01e-19 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele36g0990 COPI_assoc 1.9e-07 No_clan