Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0987 ATGAGAAAACCTTCTTCCTTTGTTTTCATCTTCTTACTTCATTGCTTGATGATGACCTCTTTAGCTTGGAGTGAGGAGAATGATATCAACAATGACAAATATTCACTTCTTGCTTTTAAATCTTTCGTCTCTTCAGATCCATACAATTTCTTAGCAAACTGGTCACTGTCTTCCTCTACATGCAATTGGGTTGGTGTTGCCTGCAATGCTCGTCATGGAAGAGTTCATTCCTTGCAACTTAGTGGTATGGATCTTATTGGTATCATATCTCCACAGCTAGGAAATCTCTCGTTCCTTGTTGAACTTGATCTTAGTGACAACAATTTTCATGGTGAAATACCCAAAGAATTGGTTCGGTTACATAGATTGAAGCTGTTTAACTTGAGCTACAATGATTTTGATCAACAAGTTCCAACATGGATAGGAGCTTTATCCTCCCTTGAGCACTTGGATCTTTGCAATAACAGCTTTAATGGATTTATTCCGCCATCTCTATCAAATCTATCAAGGTTGGAGACTTTAGATTGGAATTTTAATTTCATTGAAGGGATTATTCCACCTGAGATCGGAAATTTAAAGCACCTGAAGATTTTACGACTCTCAAAAAACAAGCTTTCTGGAGTAATTCCCCAAACAATTTCCAATTTATCTTCACTTGAAAGATTGAGTTTGTCGTATAACACTTTATCAGGAGGTCTTCCAAGGGAGATTGGTAATCTTCCACAGCTACAAATAATATATCTTTCAAATAATCGACTTTCTAGCTCTATACCGGCTTCTATATTTAATAGTTCAGTGTTACAATACATTGAACTTAACAATAATAGCTTCTCCGGAAGTCTCCCAGTAAATGTATGTGTTGGGCTTCCAAAACTTGCAAGACTTTATGTAAGTGGAAATGATTTGTTTGGTCAAATACCCTTTATTTGGCATCAATGCAAAGAATTATCAGAGTTAGATCTAAGCAATAACAGATTCAAGGAAGGAATCATTCCAAGTGACCTTGGAAATTTGACCAACCTCCAATACTTATATCTCAGCAATAATAGCTTGCAAGGTGAAATTCCATTGTCTCTTTTTAATATTTCTTCATTGAGAGAAATAAGTCTTGGTCGAAACAGTCTACAAGGTAATATCCCAATATCATCAATTGGCAATTGGGCGTTACTCGAAAGATTAGATCTAAGTTACAATTCCTTTACAGGGGAAATTCCATCATCTCTCTTCCACATTTCTTCTTTAATAGAAGTGTATCTAAGAAGCAACAATTTAAAAGGTAGATTACCATCATCAATAGGCAATTGTACGTCGCTGGAATATTTATATCTAGAAGAAAACTCCTTCACAGGAGAAATTCCATCATCTCTTTTCAATATTTCTTCTTTGAGAGAAGTATATTTAAGAAGAAACAATTTAAATGGTAATCTACCAATGTCAATTGGCAACCAGACAATGCTGGAATATTTATTTCTAGATGACAACTCCTTTACAGGTGAAATTCCTCAATCCATTTTCAATGCACATTCTATGAGAGAGTTTTACCTTTCTGAAAACCATTTAAATGGCAATTTGCCACAAAAGATGTGTCATCAACTCCCTTTACTTGAAGTCTTTGGGGTAACTGGCAATCAATTAGAGGGAAATATTCCAAAATCAATAAGTAACTGTACATCCTTGCTAGCCTTACTTCTGAGTATGAACTCATTTTCAGGTTTTGTACCCAATGAGATAGGCAATCTTGATAAGCTTGAAGATTTGGATTTATCAGATAATAATTTCAATGGATTCTTTCCTTTCCATATATTCAACATTTCAGCATTGACACAGGTATCCCTAGCAAATAATTCATTCACTAGCTTTCTCCCATCAAATTTAGGAATTGGCCTTCCCAACATGAAGGAATTGAGGTTGGGACAGAATCAACTTATTGGAAAAATTCCAAACAGCATCTCAAATGCTTCTGAGCTCACTGTGTTAGATTTATCAGGGAATAAATTTAGTGGTACTATACCCAATGTACTTGGGAATCTAACAAATTTGATAGCATTATATTTAGATGGGAATGATTTGAATGGGTTGATTCCGAAAACAATTAACAGACTGCAAAGCCTTCAATATTTAAGTCTTAGCAACAACAAATTGCAAGGGCCCATCATAAATGAATTGTGCCAAATCAAAAGTTTGAGTGAGTTGTATCTAGCTGAAAACATGTTTTCAAGAATGATTCCAAGTTGCCTCACAAATACTTCTTTGCGGAAGTTGGATTTAAGCTCTAACAAATTGATTTCTCATATACCCTATTCTCTTTGGAGTCTTGAAGATGTATTAGTCTTAGACTTATCCTCCAATGCATTGAGTGGAAGAATTCCTCGTGAGGTGTCAAACTTGAAAGCAATTATACACTTGAACTTGTCAAGAAATCAAATTATAGGAAACATCCCTATAACTATGGGTGGCTTGCAAACTTTGTTAAACTTATCTTTAGCTCATAATAAATTACAAGGGTCTATTCCTGAATCACTTGGTGGTATGATAAGCTTGGAAATTTTGGATCTCTCTCAAAATTACTTGTCTGGTGTGATTCCGAAGTCATTGGAGTCACTTGTCCATTTGAAATATATTAACCTTTCATACAATTTATTGCAAGGAGAAATTCCAAATGGTGGGTCTTTGGAAAATTTTACAGCTGATTCTTTTATGATGAATAAAGATCTTTGTGGGAAGCCCCAACTACTAGTTCGGCCATGTAGCAAAGGAAACAAGCATAACTCAAATAAAGTTATGTTGTTGATAACATGCTCACTGCCGATCGTAGTTGTCATTTTAGTTATTGTTTTATGCATAGGCTTTCTAAAGCATAAGAGAGGTCATGTTAATGATTCAACTAATAAGGATTTAATGAATTTTGACACACCCATGAGGATATCCTATTATGAGCTTCTACGAGGAACAAATGAGTTTGATGAGAGTAATCTTCTTGGAAGGGGAAGTTTTGGATCAGTCTACAAAGCAATTCTTTCAAACGGAAAAATTGTTGCTGTTAAAGTATTTAACTCAAGCCTAGAAGGAGCATCGAGTAGTTTTGAAACTGAATGCGCTGCTTTGTACAGTTTACGTCATCGCAATCTCACTAAGATAATTAGTGATTGCTCAAATGGTGAATTTAAATCCATAATAATGGAATTCATGCCAAATGGGAGCCTTGACAAATGGTTATACTCTAACAACTACTATTTGGATATCTTCCAAAGGTTGAATATAATGATTGATGTAGCAGCTGCTTTGGAGTATCTTCATCATGGTTCTCCTATACCAGTTATTCATTGTGACCTAAAACCAAACAACATATTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCCAAATTGTTAGGTGCAAGACAAATGGAAATTTATACCAAGACTTTGGCTACAATAGGCTATATGGCACCAGAGTATGGATCACAAGGAATTGTTTCTTTTAAGGGAGATGTATATAGTTATGGTATTTTGTTGATGGAAATGCTTACAAGAAAGAAACCGACAGATGAGATGTTTGTTCAAGGTTTAAGTTTGAAAGATTGGGTCAACAAATCAACACCTCATTCCATCATTAATATTCTAGATGCCACTTTGTTGCAAGAAGAAGATCAAAATGTTGGAAGCATATTGTCACATACATCACCACTTCTTGAGTTGGCTTTAGATTGTTGCAATGATTTACCTGGAGCACGAATTGATATGAAGGATGTGGTGGTAATACTCAACAAAATCAAGGCCTCATTTCTAAAAAAATGTTCGAGACACCACTAA 3825 0.3514 MRKPSSFVFIFLLHCLMMTSLAWSEENDINNDKYSLLAFKSFVSSDPYNFLANWSLSSSTCNWVGVACNARHGRVHSLQLSGMDLIGIISPQLGNLSFLVELDLSDNNFHGEIPKELVRLHRLKLFNLSYNDFDQQVPTWIGALSSLEHLDLCNNSFNGFIPPSLSNLSRLETLDWNFNFIEGIIPPEIGNLKHLKILRLSKNKLSGVIPQTISNLSSLERLSLSYNTLSGGLPREIGNLPQLQIIYLSNNRLSSSIPASIFNSSVLQYIELNNNSFSGSLPVNVCVGLPKLARLYVSGNDLFGQIPFIWHQCKELSELDLSNNRFKEGIIPSDLGNLTNLQYLYLSNNSLQGEIPLSLFNISSLREISLGRNSLQGNIPISSIGNWALLERLDLSYNSFTGEIPSSLFHISSLIEVYLRSNNLKGRLPSSIGNCTSLEYLYLEENSFTGEIPSSLFNISSLREVYLRRNNLNGNLPMSIGNQTMLEYLFLDDNSFTGEIPQSIFNAHSMREFYLSENHLNGNLPQKMCHQLPLLEVFGVTGNQLEGNIPKSISNCTSLLALLLSMNSFSGFVPNEIGNLDKLEDLDLSDNNFNGFFPFHIFNISALTQVSLANNSFTSFLPSNLGIGLPNMKELRLGQNQLIGKIPNSISNASELTVLDLSGNKFSGTIPNVLGNLTNLIALYLDGNDLNGLIPKTINRLQSLQYLSLSNNKLQGPIINELCQIKSLSELYLAENMFSRMIPSCLTNTSLRKLDLSSNKLISHIPYSLWSLEDVLVLDLSSNALSGRIPREVSNLKAIIHLNLSRNQIIGNIPITMGGLQTLLNLSLAHNKLQGSIPESLGGMISLEILDLSQNYLSGVIPKSLESLVHLKYINLSYNLLQGEIPNGGSLENFTADSFMMNKDLCGKPQLLVRPCSKGNKHNSNKVMLLITCSLPIVVVILVIVLCIGFLKHKRGHVNDSTNKDLMNFDTPMRISYYELLRGTNEFDESNLLGRGSFGSVYKAILSNGKIVAVKVFNSSLEGASSSFETECAALYSLRHRNLTKIISDCSNGEFKSIIMEFMPNGSLDKWLYSNNYYLDIFQRLNIMIDVAAALEYLHHGSPIPVIHCDLKPNNILLDEDMVAHLSDFGIAKLLGARQMEIYTKTLATIGYMAPEYGSQGIVSFKGDVYSYGILLMEMLTRKKPTDEMFVQGLSLKDWVNKSTPHSIINILDATLLQEEDQNVGSILSHTSPLLELALDCCNDLPGARIDMKDVVVILNKIKASFLKKCSRHH 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0987 1274 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 382 627 - -
Lele36g0987 1274 SUPERFAMILY L domain-like 43 382 - -
Lele36g0987 1274 SMART LRR_sd22_2 580 606 - -
Lele36g0987 1274 SMART LRR_sd22_2 844 870 - -
Lele36g0987 1274 SMART LRR_sd22_2 629 655 - -
Lele36g0987 1274 SMART LRR_sd22_2 240 272 - -
Lele36g0987 1274 SMART LRR_sd22_2 144 170 - -
Lele36g0987 1274 SMART LRR_sd22_2 748 764 - -
Lele36g0987 1274 SMART LRR_sd22_2 772 798 - -
Lele36g0987 1274 SMART LRR_sd22_2 338 364 - -
Lele36g0987 1274 SMART LRR_sd22_2 192 218 - -
Lele36g0987 1274 SMART LRR_sd22_2 701 724 - -
Lele36g0987 1274 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1063 1272 - -
Lele36g0987 1274 ProSiteProfiles Protein kinase domain profile. 987 1267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0987 1274 SMART LRR_typ_2 240 264 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 868 892 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 749 772 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 629 653 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 701 722 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 96 120 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 144 168 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 411 435 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 192 215 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 580 604 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 725 748 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 338 362 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 216 239 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 677 700 IPR003591 -
Lele36g0987 1274 SMART LRR_typ_2 844 867 IPR003591 -
Lele36g0987 1274 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lele36g0987 1274 Pfam Leucine rich repeat 606 666 IPR001611 GO:0005515
Lele36g0987 1274 Pfam Leucine rich repeat 315 375 IPR001611 GO:0005515
Lele36g0987 1274 Pfam Leucine rich repeat 679 737 IPR001611 GO:0005515
Lele36g0987 1274 Pfam Leucine rich repeat 823 881 IPR001611 GO:0005515
Lele36g0987 1274 Pfam Leucine rich repeat 413 472 IPR001611 GO:0005515
Lele36g0987 1274 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Lele36g0987 1274 Pfam Leucine rich repeat 750 809 IPR001611 GO:0005515
Lele36g0987 1274 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Lele36g0987 1274 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 628 920 - -
Lele36g0987 1274 ProSitePatterns Protein kinases ATP-binding region signature. 993 1015 IPR017441 GO:0005524
Lele36g0987 1274 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 535 1261 - -
Lele36g0987 1274 Gene3D Phosphorylase Kinase; domain 1 950 1062 - -
Lele36g0987 1274 SUPERFAMILY L domain-like 306 551 - -
Lele36g0987 1274 Gene3D Ribonuclease Inhibitor 461 530 IPR032675 -
Lele36g0987 1274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1106 1118 IPR008271 GO:0004672|GO:0006468
Lele36g0987 1274 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515
Lele36g0987 1274 Pfam Leucine Rich Repeat 390 408 IPR001611 GO:0005515
Lele36g0987 1274 Gene3D Transferase(Phosphotransferase) domain 1 1063 1272 - -
Lele36g0987 1274 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 29 186 - -
Lele36g0987 1274 ProSiteProfiles Leucine-rich repeat profile. 750 773 IPR001611 GO:0005515
Lele36g0987 1274 Gene3D Ribonuclease Inhibitor 286 460 IPR032675 -
Lele36g0987 1274 Gene3D Ribonuclease Inhibitor 612 918 IPR032675 -
Lele36g0987 1274 FunFam Piriformospora indica-insensitive protein 2 283 381 - -
Lele36g0987 1274 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 187 281 - -
Lele36g0987 1274 Gene3D Ribonuclease Inhibitor 186 285 IPR032675 -
Lele36g0987 1274 Gene3D Ribonuclease Inhibitor 531 611 IPR032675 -
Lele36g0987 1274 SMART serkin_6 987 1267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0987 1274 Pfam Protein kinase domain 988 1255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0987 1274 SUPERFAMILY Protein kinase-like (PK-like) 966 1259 IPR011009 -
Lele36g0987 1274 SUPERFAMILY RNI-like 541 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0987 Lele-ChrLele36 12482404 12487794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0987 544 895 Receptor kinase-like Gene Family AT5G46330 35.977 6.37e-46 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele36g0987 Pkinase 2.4e-45 CL0016