Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0982 ATGGGTACTATGAATCCACAGCCGCTGCAAGCACGGCCTTTCGAGGACGGAGAACTACAACTAGTGCAGGTTCCCATGCAGGTGGATGGTGTTGAAGATGGATTGAATGCTCATTGTATCAATGGACGTCGTGACGAGGTCAGTGATGGGGTCGAAGAAGCTCGAGCGAGTTCTGGGTTATCGGGGACAAATGGTTGTGCTTTCAAGTCTCGAACCAGTGAACTCACCATTTCGTTTGAAGGCGAGGTCTATGTTTTCCCAGCGGTTACGCCAGAAAAGGTACAGGCTGTATTATTATTGTTGGGAGGGTGTGAGATGCCCAGTCCCTGTAGTGCTCCCTGTACTGAGCTTTTGCTGCAACAGAACTATCAGAATGGAATTAATGATACTTCCGGGGGTTCCAAGTTTTCACGAAGATTTGCCTCCCTTGTTAGGTTTCGTGAAAAGCGAAAAGAGAGATGTTTTGAGAAAAAGATTCGGTACAGCTGCCGTAAAGAAGTTGCACAGAGGATGCATCGTAAGAATGGACAGTTTGCATCTTCAAAGGAATGTGACAGTTCTGCTGCTGAAAACTGGGACTCTAGCAATGGCGCTGCTTGTTCAGAATCTAATGAACGTAAATGCCAGCATTGTGGAATTAATGAAAAGTCTACTCCAGCAATGCGGCGAGGACCAGCTGGTCCAAGATCTCTCTGCAATGCTTGTGGGTTAATGTGGGCAAATAAGGGGACACTGAGAGATCTCAGCAAAACAGGAAAGGGCACTTCTGTGGAACAAAATGAACCGGATACTTCAATTGAAAGGAAGCCTTCCACAACTAAACCAGAAAACTCTTGTCCTAAGCAGAATGAGGAAGGAAGCCCCAAGGAGACAAAGCCTGAGCTGTTGGAATCCAGACAGCCACCCAAGAGGGCGAATGAGCAGTATACACCTGAAACTGCTGAAGCAGTTACTGACAATTTATCCATCCAAGTGGAGAACCTTGATGTTAATCTGCATGAGCAGGATCCCCTTGAAGATCTTGCTGATACATCTGGAACAGAGTTTGAGATCCCTACTGGTTTTGATGAGCAGATTGACATTGATGATTCCAACTTGAAGACCTATTGGTTATGA 1116 0.4615 MGTMNPQPLQARPFEDGELQLVQVPMQVDGVEDGLNAHCINGRRDEVSDGVEEARASSGLSGTNGCAFKSRTSELTISFEGEVYVFPAVTPEKVQAVLLLLGGCEMPSPCSAPCTELLLQQNYQNGINDTSGGSKFSRRFASLVRFREKRKERCFEKKIRYSCRKEVAQRMHRKNGQFASSKECDSSAAENWDSSNGAACSESNERKCQHCGINEKSTPAMRRGPAGPRSLCNACGLMWANKGTLRDLSKTGKGTSVEQNEPDTSIERKPSTTKPENSCPKQNEEGSPKETKPELLESRQPPKRANEQYTPETAEAVTDNLSIQVENLDVNLHEQDPLEDLADTSGTEFEIPTGFDEQIDIDDSNLKTYWL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0982 371 CDD ZnF_GATA 207 250 IPR000679 GO:0006355|GO:0043565
Lele36g0982 371 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 204 254 - -
Lele36g0982 371 ProSitePatterns GATA-type zinc finger domain. 208 235 IPR000679 GO:0006355|GO:0043565
Lele36g0982 371 Gene3D - 199 262 IPR013088 GO:0006355|GO:0008270
Lele36g0982 371 Pfam GATA zinc finger 208 244 IPR000679 GO:0006355|GO:0043565
Lele36g0982 371 Pfam CCT motif 139 181 IPR010402 GO:0005515
Lele36g0982 371 SMART GATA_3 202 255 IPR000679 GO:0006355|GO:0043565
Lele36g0982 371 Pfam tify domain 71 102 IPR010399 -
Lele36g0982 371 MobiDBLite consensus disorder prediction 246 313 - -
Lele36g0982 371 ProSiteProfiles CCT domain profile. 139 181 IPR010402 GO:0005515
Lele36g0982 371 SMART tify_2 68 103 IPR010399 -
Lele36g0982 371 MobiDBLite consensus disorder prediction 283 301 - -
Lele36g0982 371 ProSiteProfiles GATA-type zinc finger domain profile. 202 260 IPR000679 GO:0006355|GO:0043565
Lele36g0982 371 PANTHER GATA TRANSCRIPTION FACTOR 28 5 350 IPR045280 GO:0006355
Lele36g0982 371 ProSiteProfiles Tify domain profile. 68 103 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0982 Lele-ChrLele36 12427337 12432571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0982 74 262 Tify Gene Family AT1G51600 55.102 3.03e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lele36g0982 CCT 5.8e-14 CL0281