Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0971 ATGAATCACTGGAATAAGGAATCGGATGAGGATCATGTAAATTTTGATTCCTTGTATTCTATATTTATGATTTTGCTTGCTGCAGTGAAGAAGCTGAGCAATTTGACACCCCAGATCTTCGCTCTGGGAAGTTACCGATTCTCTACGGCTGCTGAGCTATCTTCCAGGAAGGGTAATTCCCAGAGGGTTCCAAATCTTATTGGGGGCAGTTTTGTTGACTCAAAATCATCTACATTCATCAATGTGATAAACCCTGCAACACAAGAAGTTGTGTCAAAACTTCCTTTGACTACAGATGAAGAGTTTAAAGCTGCCGTATCTGCTGCTAAAAGAGCTTTTCCGTCATGGCGTAATACTCCAGTCACAACTCGCCAACGTGTTATGCTGAAATTCCAGGAGCTTATACGCAGAGATATGGCAAGCATAATAAGATTTTTTGTTGATAAACTCGCTCTGACTGTTACCACTGAGCAAGGGAAGACATTGAAGGATGCACAGGGAGACGTATTCCGTGGATTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTTTACAAATGGGGGAGTATTTTTCTAATGTATCACATGGAATTGATACTTACAGCATTAGAGAACCACTTGGTGTTTGTGCTGGGATATGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCAGTGGCAGTTACTTGTGGGAACACCTTCATTCTAAAGCCATCAGAAAAAGATCCAGGTGCCGCCGTAATGCTAGCAGAATTAGCATTGGAGGCTGGTCTGCCTGAAGGTGTCTTAAATATTGTTCATGGAACCCATGATATTGTAAATGCTATTTGTGATGACGACAACATCAAAGCTGTATCTTTTGTTGGTTCCAATGTTGCTGGAATGCATATATATTCAAGAGCATCTGCTAAAGGAAAACGTGTTCAATCCAATATGGGAGCAAAAAATCATGCAATTGTCATGCCTGATGCAAACTTTGATGCTACTGTGAACGCTTTAGTTGCTGCTGGTTTTGGTGCTGCAGGACAAAGGTGCATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGATCAAAACCATGGGAATCTATATTAGTGGAGCGTGCCAGTGCACTCAAAACAAGTGTTGGAACTGATCCAGATGCAGACCTTGGTCCAGTCATCAGCAAACAGGCAAAGGAGCGCATACACAAATTAATTCAATCTGGTGTTGAAAGTGGGGCCAAACTGATGCTTGATGGAAGAAATTTAGTGGTTCCAGGCTATGAATCTGGCAATTTTGTTGGCCCAACCATCTTATCAGATGTCAGTGCAAACATGGAATGCTACAAGGAGGAAATTTTTGGCCCAGTACTTCTTTTCATGGAGGCTGACAGTTTGGAGGAGGCCATAAACGTTGTTAACAGAAATAAGTATGGAAATGGCGCTTCTATATTTACTACATCTGGTGTTGCAGCAAGGAAGTTTCAGACCGAGATTGAAGCTGGACAGGTGGGCATCAACGTTCCCATTCCAGTTCCATTGCCTTTTTTCTCATTTACTGGCAACAAGTCTTCATTTGCAGGAGATCTCAATTTCTATGGGAAGGCTGGGGTTAACTTTTATACTCAGATTAAAACAGTGACTCAGCAATGGAAGGATTCTGCTGGTGGTAGCAGAATTAACTTGGCAATGCCAACCTCTCAAAAATCTTGA 1701 0.4233 MNHWNKESDEDHVNFDSLYSIFMILLAAVKKLSNLTPQIFALGSYRFSTAAELSSRKGNSQRVPNLIGGSFVDSKSSTFINVINPATQEVVSKLPLTTDEEFKAAVSAAKRAFPSWRNTPVTTRQRVMLKFQELIRRDMASIIRFFVDKLALTVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYFSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAAVMLAELALEAGLPEGVLNIVHGTHDIVNAICDDDNIKAVSFVGSNVAGMHIYSRASAKGKRVQSNMGAKNHAIVMPDANFDATVNALVAAGFGAAGQRCMALSTVVFVGGSKPWESILVERASALKTSVGTDPDADLGPVISKQAKERIHKLIQSGVESGAKLMLDGRNLVVPGYESGNFVGPTILSDVSANMECYKEEIFGPVLLFMEADSLEEAINVVNRNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKSSFAGDLNFYGKAGVNFYTQIKTVTQQWKDSAGGSRINLAMPTSQKS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0971 566 CDD ALDH_F6_MMSDH 63 547 IPR010061 GO:0004491
Lele36g0971 566 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 65 547 IPR010061 GO:0004491
Lele36g0971 566 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 316 516 IPR016163 GO:0016620
Lele36g0971 566 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 67 322 - -
Lele36g0971 566 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 316 516 - -
Lele36g0971 566 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 524 IPR016162 GO:0016491
Lele36g0971 566 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 341 352 IPR016160 GO:0016491
Lele36g0971 566 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 29 563 IPR010061 GO:0004491
Lele36g0971 566 SUPERFAMILY ALDH-like 61 548 IPR016161 GO:0016491
Lele36g0971 566 Pfam Aldehyde dehydrogenase family 71 543 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0971 Lele-ChrLele36 12248657 12256196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0971 23 531 Aldehyde Dehydrogenase Gene Family AT2G14170 77.407 0.0 812