Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0968 ATGGGATTCTTTTGCAGAGATACAATCCTAGTCGCTGTTTCGCTCATATTTGGCTTCTCCTGTTTTCACTATTGCAGTGCCAAAGACACCATCAAATCATCACAATACGTTACGGATCCAGAAACTGTTAGTTCCAATGGAGGCTCCTTCATATTGGGATTTTTCAGTCCAGAAAATACTACAAATCGCTACATGGGAATTTGGTATAAATCCCAATCCAATATCATATGGGTAGCTAACAGAAACCACCCATTGACGGATTCTTCTGGGACTGGGACTATTACAATTTCTGCAGATGGCAATCTTGTGTTATTAAATGGGACAAACCACACTATTTGGTCATCAAATGTGTCAAATATTGCCCTCAATAATGCAACTTGTCAGCTTCAAGATTCTGGAAATCTTGTCCTCACTACAGATTCTGCAGAAAAGAACATCTTATGGCAAAGTTTTGCGAATCCTTCTGACTCATTAATCCCCCAAATGAAACTTACAAGCAACAAAAGAACAGGTGAGAAACTAGGATTAACATCATGGAAAAGTTTGTCAGATCCATCCGTGGGTAACTTCTTTATGACACTTGAACGCCTAGATATTCCTGAAGTATTCATCTGGAATGGAGCTCGCCCATATTGGCGAAGTGGTCCATGGAATGGTAGCACATTTACTGGAGTATACTTTATGAGTAACCTTTATCTTAAAGGGTTTCATGTCATAGATGATGGAGAAGGAACTATTTCTTTGTCTTTCAGTTTTTCTGATTTGACAGGATTCACTATATTTGCCTTAGACTTTCGAGGCCTATTATATGAAAAAGATTGGTATAATGACACGATACAGCCACAATATAATTATAGTATTCAAACTTCAGAATGTGATATTTATGGTTTATGTGGATCATTTGGAAGCTGCAACCCAATTAGTTCACCTATATGCAACTGTTTGAGAGGTTTTGAACCAAGCAATAGAAAGGAATGGGATATGCAAAACTGGACTAATGGTTGTGTTAGGAAGACAACTTTGCAGTGTGATAAGTTGAAAAATGGAGGTGCACAAGGTGGAGAAGAAGATGGATTTTTGAAGTTGGAGATGGTTAAAGTGCCAGATTTTGCAGAATGGTCTTTGGCTTCAGAGGACACCTGCAGAAAACAGTGCTTGGAGAATTGTACTTGTGTAGCTTATTCATATAGTCCTGAAATAGGTTGCATGTCTTGGAAGGGAAATCTAACTGATATACAACAGTTCCCAACAGATGGACTAGATCTATACGTTCGTATAGCCTATTCAGATCTTGAAAAGAATAATAGACATGCAAGAAAGATCATTATCATTACAACAGTAATAATAGGAACACTTATCATTGCTTTGGGTACATATGTTTTATGGAAAAGGATAACGAAACATTCAGAGACGAAATTGAAGAACAGATCTTTCTTACGATTAAAGAAACTTCAAGACGATTCAGAGAAAACAGAAGACACAATTATTGGAGAATTGTCACATGTCACATTGCCAGAGGTATTGACATATGATCTTGAAAAGGTTGCGACTGCCACGAACAATTTTGACATCTCCAATAAGCTTGGGCAGGGTGGCTTTGGTCCAGTGTACAAGGGGATATTGCAAGATGGTCAGAATATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGACTAGAGGAATTCATGAACGAGGTCATTGTCATTTCTAAGCTTCAACACCGTAATCTTGTAAAACTTATTGGCTGCTGCCTTGAAAGAGGAGAGAAGATGTTAATCTATGAATACATGGCGAATAAAAGTTTAGATGCATTTATTTTTGATCCACCAAACCATAAACTCCTAGATTGGAGAAAGCGCTTTGACATAATCAAAGGAGTGGCTCGAGGAATGCTTTATCTTCATCGAGATTCAAGACTAAAAATTATACATAGAGATCTAAAGGCAAGCAACATATTGCTAGATGAGAACTTGAATCCAAAAATATCAGATTTTGGTATGGCAAGAATTTTTCAAGGGAGTACTGAAGATCAAGCTAACACAAGAAGAGTAGTTGGAACCTATGGTTATATGTCGCCAGAGTATGCAATAGAAGGATTGTTTTCAGAGAAATCCGATGTGTTTAGTTTTGGAGTTTTACTATTAGAGATTGCTAGTGGAAGAAGAAACTCAAGCCTTTTTAACTATGAGGCTTCTCTCAGCCTTCTAGGATTTACATGGAAATTATGGAATGAGAAGAATGCTGCAACGGTAATAGATCCTAGAATATATGATACCAACGTGGAGAAAGATATAGTAAGATGCATACACATAGGAATGTTATGCGTGCAAGAACTTGCAAGAGAGAGGCCAAGTATGAGCTCTGTGGTTTCCATGCTTAGCGGTGAGATTGTAGATCTTCCTCCTCCAAAACAACCTGCATTCATCCAATGGCAGAGTTTGGGTTTGTTGAGTTCATCAGCATCCAATGCAGAAAGTCAAAGATCGTTTTCAAACAATGGTGTTAGCATTACACAGATGTATGGCAGATGA 2535 0.3795 MGFFCRDTILVAVSLIFGFSCFHYCSAKDTIKSSQYVTDPETVSSNGGSFILGFFSPENTTNRYMGIWYKSQSNIIWVANRNHPLTDSSGTGTITISADGNLVLLNGTNHTIWSSNVSNIALNNATCQLQDSGNLVLTTDSAEKNILWQSFANPSDSLIPQMKLTSNKRTGEKLGLTSWKSLSDPSVGNFFMTLERLDIPEVFIWNGARPYWRSGPWNGSTFTGVYFMSNLYLKGFHVIDDGEGTISLSFSFSDLTGFTIFALDFRGLLYEKDWYNDTIQPQYNYSIQTSECDIYGLCGSFGSCNPISSPICNCLRGFEPSNRKEWDMQNWTNGCVRKTTLQCDKLKNGGAQGGEEDGFLKLEMVKVPDFAEWSLASEDTCRKQCLENCTCVAYSYSPEIGCMSWKGNLTDIQQFPTDGLDLYVRIAYSDLEKNNRHARKIIIITTVIIGTLIIALGTYVLWKRITKHSETKLKNRSFLRLKKLQDDSEKTEDTIIGELSHVTLPEVLTYDLEKVATATNNFDISNKLGQGGFGPVYKGILQDGQNIAVKRLSRASGQGLEEFMNEVIVISKLQHRNLVKLIGCCLERGEKMLIYEYMANKSLDAFIFDPPNHKLLDWRKRFDIIKGVARGMLYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGMARIFQGSTEDQANTRRVVGTYGYMSPEYAIEGLFSEKSDVFSFGVLLLEIASGRRNSSLFNYEASLSLLGFTWKLWNEKNAATVIDPRIYDTNVEKDIVRCIHIGMLCVQELARERPSMSSVVSMLSGEIVDLPPPKQPAFIQWQSLGLLSSSASNAESQRSFSNNGVSITQMYGR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0968 844 SMART blect_4 34 154 IPR001480 -
Lele36g0968 844 Gene3D Phosphorylase Kinase; domain 1 473 597 - -
Lele36g0968 844 Pfam D-mannose binding lectin 75 180 IPR001480 -
Lele36g0968 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 185 IPR036426 -
Lele36g0968 844 CDD B_lectin 34 154 IPR001480 -
Lele36g0968 844 SMART ntp_6 354 426 IPR003609 -
Lele36g0968 844 PIRSF SRK 3 844 IPR024171 GO:0004674
Lele36g0968 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Lele36g0968 844 Gene3D - 23 152 IPR036426 -
Lele36g0968 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 802 - -
Lele36g0968 844 CDD STKc_IRAK 528 785 - -
Lele36g0968 844 ProSiteProfiles Bulb-type lectin domain profile. 28 150 IPR001480 -
Lele36g0968 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 785 - -
Lele36g0968 844 Pfam PAN-like domain 355 412 IPR003609 -
Lele36g0968 844 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lele36g0968 844 Gene3D Transferase(Phosphotransferase) domain 1 598 800 - -
Lele36g0968 844 Pfam Protein tyrosine and serine/threonine kinase 524 794 IPR001245 GO:0004672|GO:0006468
Lele36g0968 844 ProSiteProfiles PAN/Apple domain profile. 343 427 IPR003609 -
Lele36g0968 844 SUPERFAMILY Protein kinase-like (PK-like) 504 794 IPR011009 -
Lele36g0968 844 CDD PAN_AP_plant 339 427 - -
Lele36g0968 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 151 - -
Lele36g0968 844 SMART serkin_6 522 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0968 844 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Lele36g0968 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 484 597 - -
Lele36g0968 844 ProSiteProfiles Protein kinase domain profile. 522 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0968 Lele-ChrLele36 12221688 12224867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0968 479 810 Receptor kinase-like Gene Family AT3G45860 54.192 6.56e-120 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele36g0968 PK_Tyr_Ser-Thr 8.1e-49 CL0016