Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0955 ATGTTGGTAGTATCAGTTTTCTTCCTCTTGATAGCCCATGCCTTTTCCTTAGAATATAGCTTCACCAGTTTCCAGCCCAAAGATTATAACAACATATCGTGTGAATTAACCGCTTACATTGCAGAACCATACCTCTACTTAGTAACCAACCAAAAGGAACTATCCTCGAAAAATAGTCAGGGTCGAGCCACATATCACGAACCGATGCACTTGTGGGACAAAGCCACCAAGAAACTCACAAATTTCAACACCAATTTCAACTTCACGATTGATTCACTGGGCGGAACTGTTTATGCAGATGGGATGGCTTTCTTCTTAGCGCCTTATGGTTCAAAGCTTCCTGATCCACCAAAAGTTGGAGGAGGTTCTATGGGTCTGATTATTGGAGGTCAAGAAACCATACTTAATTCAACAGATCATCCATTTGTTGCTGTGGAGTTTGACATCTTTCCTAATAAAGAAGGCTGGGATCCTCCGGGGGTACATGTGGGTGTCGATATCAATTCTATTAAATCTGTTACTAATGTGACTTGGTATGCTAATATCACAGGAGGCAGAACAAATGAGGCTTTCATCAGCTACAATGCAAGTACTCATAATTTAAGCATCTCCTTCACTGGTGTTGATAGGAATAACAACATTGTGTGGCAACATCTTCATCATATAGTTGACCTACGAAATTATCTGCCTGAATTGGTTACTTTTGGTTTCTCAGCTGCTACAGGAGCTTTCTTTGCAACACACAGGATCAATACATGGAGTTTCTACTCAGAGGACTTCCCAAATGTTGCTCCCAGTCCAAGCCCAAGACCGAGTCTGAACCCGAACCCTAGCCGAACAAGAAATACCATAGGACTTGCAACAGGATTAGGGGTTGGAGGCTTGGTTTTAGTTTGTGGGGTGGTATTGTTTGTCTTGTGGAAGAACAAACGAAAAAGGGAAGATGATGAGTCTAATGAGAACATGAATGATGACTTCGAAAGAGGAACAGGTCCCAAAAAATACTCATATGCTGAACTAACAAGTGCTACAAATTATTTCAAAGATGGGCAGAAGCTTGGACAGGGAGGATTTGGAGGTGTCTACAGAGGTTTTCTCAAAGATGCAAACTCCGATGTCGCCATAAAGAGAATATCAAAGGATTCTAAACAAGGGAAGAAGGAGTTTGCTTCGGAAGTAAGAATTATCAGTCAACTAAGGCATCGGAACTTGGTGCAGCTAGTCGGCTGGTGTCATGAAAGGAAAGAACTATTGCTGGTTTATGAGTACATGCCAAATGGAAGTTTAGATTCTCATCTATTCAACGACGAAAGGTTGCTGACATGGTCAATTAGATTTAAAATAGCTCAAGGCTTGGCCTCTGCATTATTGTACCTGCACGAAGAATGGGAACAATGTGTGGTTCATAGGGACATAAAATCAAGCAACATCATGCTAGACTCCAACTTCAATGCAAAGCTTGGAGATTTTGGATTAGCACGACTCGTAGACCACGCAAAAGGAGCACAAACTACAGCTTTGGCAGGAACTATTGGCTATATGCCTCCTGAATGTGTCACAAACGGAAAGGCTAGTAAGGAATCCGATGTTTACAGTTTTGGAGTTGTTGCTTTGGAAATAGCTTGTGGAAGAAAACCCATCAACCCTGAGGCTCCAGAGAACGAAATAAACATAGTGAATTGGGTATGGGATCTTTATGGAAGTGGGAGAATTCTCGAAGCAGTTGATTCAAGACTAGAAGGAAACTATGACGAGGATCAAATCAAATGCCTGATGATTGTTGGGTTGTGGTGTGCTCATCCTGATCACAACCGTAGACCTTCAATAAGGCAAGCAATTCATTTGCTTAACTTTGAAACTCCATTTCCCAGTCTTCCTTCAAGTTATCCCGTACTTTCATATAATGAATTTCCAGCATCGTTTTCAATTCTATCCAGCTCCAATACTTCGTATGTAAGCCAAAACCAGAATATAAGCTTTAGTTCCAACACAAACTCTTCTGGCTTCACTACAACTTCTGATGATAATGTTTCATCAAGTGTATCACTTTTGTACTCGTGCAAAAATTAA 2070 0.4106 MLVVSVFFLLIAHAFSLEYSFTSFQPKDYNNISCELTAYIAEPYLYLVTNQKELSSKNSQGRATYHEPMHLWDKATKKLTNFNTNFNFTIDSLGGTVYADGMAFFLAPYGSKLPDPPKVGGGSMGLIIGGQETILNSTDHPFVAVEFDIFPNKEGWDPPGVHVGVDINSIKSVTNVTWYANITGGRTNEAFISYNASTHNLSISFTGVDRNNNIVWQHLHHIVDLRNYLPELVTFGFSAATGAFFATHRINTWSFYSEDFPNVAPSPSPRPSLNPNPSRTRNTIGLATGLGVGGLVLVCGVVLFVLWKNKRKREDDESNENMNDDFERGTGPKKYSYAELTSATNYFKDGQKLGQGGFGGVYRGFLKDANSDVAIKRISKDSKQGKKEFASEVRIISQLRHRNLVQLVGWCHERKELLLVYEYMPNGSLDSHLFNDERLLTWSIRFKIAQGLASALLYLHEEWEQCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHAKGAQTTALAGTIGYMPPECVTNGKASKESDVYSFGVVALEIACGRKPINPEAPENEINIVNWVWDLYGSGRILEAVDSRLEGNYDEDQIKCLMIVGLWCAHPDHNRRPSIRQAIHLLNFETPFPSLPSSYPVLSYNEFPASFSILSSSNTSYVSQNQNISFSSNTNSSGFTTTSDDNVSSSVSLLYSCKN 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0955 689 FunFam Lectin-domain containing receptor kinase A4.3 424 636 - -
Lele36g0955 689 Pfam Protein kinase domain 347 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0955 689 SUPERFAMILY Protein kinase-like (PK-like) 331 637 IPR011009 -
Lele36g0955 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 259 IPR013320 -
Lele36g0955 689 CDD STKc_IRAK 353 617 - -
Lele36g0955 689 Gene3D Transferase(Phosphotransferase) domain 1 424 637 - -
Lele36g0955 689 CDD lectin_legume_LecRK_Arcelin_ConA 17 257 IPR001220 GO:0030246
Lele36g0955 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Lele36g0955 689 FunFam L-type lectin-domain containing receptor kinase IX.1 332 423 - -
Lele36g0955 689 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Lele36g0955 689 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0955 689 PANTHER - 47 620 - -
Lele36g0955 689 Pfam Legume lectin domain 17 262 IPR001220 GO:0030246
Lele36g0955 689 Gene3D - 15 262 - -
Lele36g0955 689 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Lele36g0955 689 SMART serkin_6 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0955 Lele-ChrLele36 11969945 11972014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0955 61 635 Receptor kinase-like Gene Family AT5G10530 49.490 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele36g0955 Pkinase 1.8e-53 CL0016