Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0945 ATGGGGAGAGGGAAGATTGCGATTCAGAGGATTGACAATTCAACCAACAGGCAAGTCACTTTCTCAAAGAGACGAAGTGGTTTGCTCAAGAAAGCAAGGGAACTTTCGATCCTCTGCGACGCACAAGTTGGGGTTATCGTCTTCTCCAGCACCGGCAAGCTCTATGAATATGGAAGCTCCAGCATGACGTCAATTATTGATCGCTACAATAAACAAAAAGATCAGGAACATCATCCACTTATGAATCCAGCTTCAGAAGCCAAGTTTTGGCAGAGAGAAGCAACGGTCTTGAGGCAACAACTGCAACACTTACAGGAATTTCACAGGCAATTCATGGGTGAAGAACTTTCTGGTTTGGGAATTAACGAATTGAAAGGTTTGGAAAATCAACTGGAGATGAGTTTAAAAAATATCCAGAGCAAGAAGGATCAAATTTTAACAAATGAGATTAAAGAGTTACAACAAAAGGGACATCAAATTCTTCAAGAAAATGTACAACTCGAAAAAACGATGGAAGACATTAGTAAAGAAAATGCAGAATTAAAGACGAAGATTCGTGAAGCAAGGGTTGTGAATGAGGAAAATGGGAAGTCTGTCGGCAACAAATATGAGTCACATGCATCTGTCAATCTCCAGCTGAGCCAGCCACAGTCTCAATCTAGTGAAACACCAGCTAAAGCAATGGAGCTTGGGTAA 696 0.4109 MGRGKIAIQRIDNSTNRQVTFSKRRSGLLKKARELSILCDAQVGVIVFSSTGKLYEYGSSSMTSIIDRYNKQKDQEHHPLMNPASEAKFWQREATVLRQQLQHLQEFHRQFMGEELSGLGINELKGLENQLEMSLKNIQSKKDQILTNEIKELQQKGHQILQENVQLEKTMEDISKENAELKTKIREARVVNEENGKSVGNKYESHASVNLQLSQPQSQSSETPAKAMELG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0945 231 Gene3D - 13 83 IPR036879 GO:0003677|GO:0046983
Lele36g0945 231 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Lele36g0945 231 MobiDBLite consensus disorder prediction 201 225 - -
Lele36g0945 231 FunFam MADS-box transcription factor MADS-MC 13 85 - -
Lele36g0945 231 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Lele36g0945 231 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Lele36g0945 231 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Lele36g0945 231 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele36g0945 231 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Lele36g0945 231 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Lele36g0945 231 MobiDBLite consensus disorder prediction 192 231 - -
Lele36g0945 231 SUPERFAMILY SRF-like 2 78 IPR036879 GO:0003677|GO:0046983
Lele36g0945 231 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 205 - -
Lele36g0945 231 Pfam K-box region 85 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele36g0945 231 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Lele36g0945 231 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Lele36g0945 231 Coils Coil 150 191 - -
Lele36g0945 231 Coils Coil 121 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0945 Lele-ChrLele36 11590331 11596624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0945 1 229 MADS-box Gene Family AT4G37940 54.585 3.24e-80 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Lele36g0945 K-box 4.1e-24 No_clan