Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0906 ATGAAATGCTTCTTACTCTTCCTTATCATTCCCTTCCTCTGTTCGTCTACCATTATTGAAGCTCGACCTACTTATCTTTACCACAACTGCTCCACCACCGGCAAAACCTTTTCTTCTAATAGCACCTTCCGATCCCACCGGACCACCCTCCTCTCCTCCTTAGCTTCCGCCAATGCCGGCTTCTCCAACACGACCGTCCCCGGAGGCGGCAGTGACACCATCTACGGCCTCTTCATGTGCCGGGGCGACGTCTCCCTGCCGGTGTGCCGCCAATGCGTCGTTAACGCAACCCAACGGCTACCTTTCGAGTGCCCGTTTTCGAAGGAGGCCGTAATATGGTACGACGAGTGCATGCTTCGCTATTCTAACACCTCTTTCTTCTCCACCATTAACAAATGGCCGACCGTCGTCATGTTGAACCCGAACAATATCTCTGATTCGAACCAGGCAAGATTTAATAGTTTTTTGAGGAGTTTTATGAATGAGACGGCAAGTAAGGTGGCGGCAAAACCTGCGGCGTTGTCGACGGAGGAGGGGACGGCGTATGTGAAGAACCAAGCAGATTTTGAGAATCAAACTCTGTACAGTCTAGCTCAGTGCACGCCGGACCTACCAATTGAAGATTGCAGAAGTTGTTTGAGTGGTGTGATCGGGAACATGCCGTCGTGTAGTGAGGGGAAGATCGGGGGAAGAGCTGTGAATCCCAGTTGCAATGTTCGCTATGAGTTGTTTTCATTCTATGATTCTAATGAGCAACTCGGTCCGACTCCGTCGCCGGCACCGGCCCTGACTCCGACAGGTAGACCGAATCCATTTTTCCCTCGAACCAATTCTTCAAATCATCATCCACCTCGACCTTCAGCAAAGACAGTTGTGATAGTTGTGGCTTCTCTTCTTGTTGGCGGAATAATTTTTTATTTGGCTTACTGTCTCTTAAAGATTCGAATAAAGAAGAGTCATAGGGCTAATCTCAGACAAAAATACTTTGGAAGGGAAAGCACAACTTTAGAGCATCTGCAATTTAATCTAGCTACAATTGAGTCTGCGACAAATAAGTTTTCTCATGACAATAGTTTAGGGAGAGGTGGATTTGGACAAGTTTACAAGGGTATTCTTTCAAATGGCCAAGAAATAGCTGTGAAGAGACTTTCAAAAAGTTCTGGCCAAGGTGCGGAAGAGTTTAAGAACGAGGTTTTATTAATAGCTAGACTTCAGCATAGAAATTTGGTGGCGTTATTAGGATTCTGCATTGAAGAGGAAGAGAAACTACTTGTTTATGAATATGTTCCTAACGGAAGCCTTGACTACTTTTTATTTGGTTCCCAAAATACCAGAGTATTAGATTGGACGAAGTGTAGCAAAATCATAGGAGGAGTTGCTCGAGGAATTCTTTATCTTCATGAATATTCTCGCCTAAAAATCATACACCGAGATCTCAAACCTAGCAATATTTTGTTGGATGACGAAATGAATCCAAAAATTTCAGATTTTGGCTTGGCAAGAATGGTTGCTATTAGTGAAAATGAGGGAAGTACAAATCGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCTATGTTCGGACAATATTCTGAAAAGTCAGATGTTTTTAGTTTTGGAGTTATAGTTTTAGAAATTATAAGTGGAAGGAAGAATACAGGATGTCATGATTCACAATACGCTGATGGCCTCTTAAGCTATACTTGGAAGCGATGGAGCGATGACAAATTGGTAGAGATATTGGATTCAAATATAAATGAATTGGGATCATACAATGAAGTGATAAAGTGCATTCAAATTGGTTTGTTATGTGTTCAAGAGAATCCAAATACAAGGCCTTCCATGGCTACGGTTGTTTCATATCTTAGCAATGATTCAATTCAATTGCCATTGCCACAGGAACCTGCTTTCTTCTTGCATGGTCATCAACCAGAGCCTATTATCACCAATACAAGCGGAGAATCATGCTCTGTTAATGAAGCTTCCATTACTGAATTCTTTCCTCGTTAA 2016 0.4276 MKCFLLFLIIPFLCSSTIIEARPTYLYHNCSTTGKTFSSNSTFRSHRTTLLSSLASANAGFSNTTVPGGGSDTIYGLFMCRGDVSLPVCRQCVVNATQRLPFECPFSKEAVIWYDECMLRYSNTSFFSTINKWPTVVMLNPNNISDSNQARFNSFLRSFMNETASKVAAKPAALSTEEGTAYVKNQADFENQTLYSLAQCTPDLPIEDCRSCLSGVIGNMPSCSEGKIGGRAVNPSCNVRYELFSFYDSNEQLGPTPSPAPALTPTGRPNPFFPRTNSSNHHPPRPSAKTVVIVVASLLVGGIIFYLAYCLLKIRIKKSHRANLRQKYFGRESTTLEHLQFNLATIESATNKFSHDNSLGRGGFGQVYKGILSNGQEIAVKRLSKSSGQGAEEFKNEVLLIARLQHRNLVALLGFCIEEEEKLLVYEYVPNGSLDYFLFGSQNTRVLDWTKCSKIIGGVARGILYLHEYSRLKIIHRDLKPSNILLDDEMNPKISDFGLARMVAISENEGSTNRIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEIISGRKNTGCHDSQYADGLLSYTWKRWSDDKLVEILDSNINELGSYNEVIKCIQIGLLCVQENPNTRPSMATVVSYLSNDSIQLPLPQEPAFFLHGHQPEPIITNTSGESCSVNEASITEFFPR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0906 671 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Lele36g0906 671 Gene3D Phosphorylase Kinase; domain 1 314 428 - -
Lele36g0906 671 ProSiteProfiles Gnk2-homologous domain profile. 132 246 IPR002902 -
Lele36g0906 671 Pfam Protein kinase domain 355 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0906 671 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 126 - -
Lele36g0906 671 Pfam Salt stress response/antifungal 30 123 IPR002902 -
Lele36g0906 671 Pfam Salt stress response/antifungal 147 242 IPR002902 -
Lele36g0906 671 MobiDBLite consensus disorder prediction 253 286 - -
Lele36g0906 671 Gene3D Transferase(Phosphotransferase) domain 1 429 631 - -
Lele36g0906 671 MobiDBLite consensus disorder prediction 270 285 - -
Lele36g0906 671 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 667 - -
Lele36g0906 671 ProSiteProfiles Protein kinase domain profile. 353 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0906 671 Gene3D - 22 126 IPR038408 -
Lele36g0906 671 Gene3D - 135 246 IPR038408 -
Lele36g0906 671 SMART serkin_6 353 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0906 671 FunFam cysteine-rich receptor-like protein kinase 10 429 631 - -
Lele36g0906 671 CDD STKc_IRAK 359 624 - -
Lele36g0906 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Lele36g0906 671 ProSiteProfiles Gnk2-homologous domain profile. 25 126 IPR002902 -
Lele36g0906 671 SUPERFAMILY Protein kinase-like (PK-like) 336 649 IPR011009 -
Lele36g0906 671 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 315 428 - -
Lele36g0906 671 FunFam Cysteine-rich receptor-like protein kinase 10 134 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0906 Lele-ChrLele36 10952068 10956247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0906 6 671 Receptor kinase-like Gene Family AT4G05200 44.135 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele36g0906 Pkinase 8.2e-49 CL0016