Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0883 ATGAAGCTTACTTCATTTTACATTCTGCTGTTCCTCTCTATGCTTTCTCAATCATTCCATTGTTGCTGCCAGCCTGACCTAGATACTGTCACAGACTGCTCTTTCAGCGACACAAAGAAAGTGGCATATGATTGCATAGGCCTCCAAAAGTCATGCACATCCTTTGTAACTTTCAGATCAAATCCTCCCTATAATAACCCACTAAACATTGCCAATCATCTTGGCTCAGAAGCATCTTCCATAGCCTCCATCAACAACATATCAAGCAACACCAAGAACATTCCTTCTAATCAAATTGTTATTGTTCCAATCGATTGTTCCTGTTTGGGTGGTATCTACCAGCATCCCGCTTCTTATGCGCTTAAGGCAGGTGACACCTACTTTTTGGTGGCCAACAATTCTTATCAAGGCCTCACCATTTGCCAGATGCTACGCCGGCAAAATTATGCCATCAATCTCACTGTGGGTGAACAAGTTTCAGTTCCAGTCTTATGCGCTTGTCCTACTGCTGACCAGATCTCAGATGGGGTCTCCTCCCTGCTAGTTTACACAGTTGTCTTTGGGGATTCACCTGAATCAATCGCACAGGCCTATGGTGCGAATCTAGAGACTATGATGACTGCTAATCAATTGCGTTCAAACACCCCCATATATCCCTTCACAACTCTCTTAGTTCCCCTCAAACCCTCCTCTTGTAAACTCAGTCCACATTTATTCTACTGCACCTGTTCATTCGCCCAGAAATACCTTCCAAATTCAAGTTTCAACACTCTCGATTGTGATCATACTCAAATTGATTCTCATGGTTTCCCCATCAAATTGGTTGCTTCCCTAGGTGTTGGTATTGGTGCTGGAATTTTGAGCTTATTTCTTTCGGGTCACAAGTTGTATCAATACCTAAAACAAAAGCAAGAAAGAGTTCGTAAGGAAAAATTGTTCAAGAAAAATGGTGGCCTCTTGCTACAAGAAAAGATGTCATGTTATGGAAATGGAGACAAAGCAAGACTTTTTACAGCAGAAGAGCTGAAAGGAGCAACAGATAACTACAATCAAAATAGGTTTCTTGGTCAAGGGGGTTTTGGAACTGTTTATAAAGGAATGTTACCAGATGGTACCATTGTTGCAGTTAAGAAGGCGAAAGAAATCGTGAGAAACCAGATTGAGACTTTCATTAATGAAGTGGTGATTCTATCCCAAATAAACCACAGGAACATTGTGAAACTCTTGGGTTGGTGCCTAGAGACTGAAGCCCCGTTATTAGTATATGAATTTATTCCTAATGGAACACTTTCTCACCACATCAATAACCAGGAACTTGAAGGAAAGCTTTCATGGGGCACCCGCCTCAGAATTGCTTGTGAGGTTGCAGGGGCAGTGGCCTATATGCATTCTGCAGCTTCCATTCCTGTCTTTCATAGAGACATCAAGACTTCCAACATACTCCTGGATCATAAGTACAGTGCCAAAGTATCTGATTTCGGGACTTCAAGATCAGTGCCAAATGATCGGACTCACTTAACCACAGTGGTACAAGGCACTTTTGGGTATATTGATCCTGAATATTTCCAATCCAGTCAATTCACAGATAAAAGTGATGTATATAGTTTTGGGGTTGTACTCATAGAGCTCATTTCTGGAAAGAAGCCCATTACCTTCTCAGAAGAAGATCAAGGTCAGAACCTTGTCACAGAATTTATTTCTTTGATGAAGAAGGACCGAGTTTTTGATATTTTAGATGCTAGAGTTGTTCATGAAGGAAGGAAAGATGACATTCTTAGTGTAGTGAATCTAGCAAAGAGATGCGTGAGACTCAATGGGAAGAAGAGACCCACAATGCGAGAGGTTTCAACAGAGTTAGAAGGACTGAGAAAGACACAAAATTCTTTAGAGATCATTGATTGTTCTCTTGAGTTTCCACATGATAGAAAATCATCTACGCATTCCACTCCTTCTGAATCAGACCAAGAATCCACAGAAGAAAGCATCTCATTAATGTTCCAAATCGACTCCACACCCATCTGA 2022 0.412 MKLTSFYILLFLSMLSQSFHCCCQPDLDTVTDCSFSDTKKVAYDCIGLQKSCTSFVTFRSNPPYNNPLNIANHLGSEASSIASINNISSNTKNIPSNQIVIVPIDCSCLGGIYQHPASYALKAGDTYFLVANNSYQGLTICQMLRRQNYAINLTVGEQVSVPVLCACPTADQISDGVSSLLVYTVVFGDSPESIAQAYGANLETMMTANQLRSNTPIYPFTTLLVPLKPSSCKLSPHLFYCTCSFAQKYLPNSSFNTLDCDHTQIDSHGFPIKLVASLGVGIGAGILSLFLSGHKLYQYLKQKQERVRKEKLFKKNGGLLLQEKMSCYGNGDKARLFTAEELKGATDNYNQNRFLGQGGFGTVYKGMLPDGTIVAVKKAKEIVRNQIETFINEVVILSQINHRNIVKLLGWCLETEAPLLVYEFIPNGTLSHHINNQELEGKLSWGTRLRIACEVAGAVAYMHSAASIPVFHRDIKTSNILLDHKYSAKVSDFGTSRSVPNDRTHLTTVVQGTFGYIDPEYFQSSQFTDKSDVYSFGVVLIELISGKKPITFSEEDQGQNLVTEFISLMKKDRVFDILDARVVHEGRKDDILSVVNLAKRCVRLNGKKRPTMREVSTELEGLRKTQNSLEIIDCSLEFPHDRKSSTHSTPSESDQESTEESISLMFQIDSTPI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0883 673 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 93 628 IPR045274 GO:0007166
Lele36g0883 673 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Lele36g0883 673 SMART serkin_6 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0883 673 CDD LysM 182 225 IPR018392 -
Lele36g0883 673 SUPERFAMILY LysM domain 181 226 IPR036779 -
Lele36g0883 673 Gene3D Phosphorylase Kinase; domain 1 319 424 - -
Lele36g0883 673 CDD STKc_IRAK 355 622 - -
Lele36g0883 673 SMART LysM_2 182 226 IPR018392 -
Lele36g0883 673 FunFam Wall-associated receptor kinase 2 425 637 - -
Lele36g0883 673 Gene3D LysM domain 172 234 IPR036779 -
Lele36g0883 673 MobiDBLite consensus disorder prediction 640 662 - -
Lele36g0883 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Lele36g0883 673 ProSiteProfiles LysM domain profile. 181 225 IPR018392 -
Lele36g0883 673 SUPERFAMILY Protein kinase-like (PK-like) 333 619 IPR011009 -
Lele36g0883 673 Pfam LysM domain 183 226 IPR018392 -
Lele36g0883 673 FunFam Wall-associated receptor kinase 2 319 424 - -
Lele36g0883 673 ProSiteProfiles Protein kinase domain profile. 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0883 673 Pfam Protein kinase domain 349 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0883 673 Gene3D Transferase(Phosphotransferase) domain 1 425 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0883 Lele-ChrLele36 10369216 10371704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0883 279 626 Receptor kinase-like Gene Family AT1G16130 55.301 1.85e-135 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele36g0883 Pkinase 3.6e-50 CL0016