Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0870 ATGGGTGAGGAATTTGAAGCTGGGATTTGTGGTGGGAATAATTACTGGTGGATCAACAACAACATGATGATGAACTCAACAACAACGCGAAGTGTTTTGCCTTTGATGATGAGTTCATCTCCGTGTTCTGTGCTCACAGCTAACAACGATCTTTCTTCAGGAGGAGGAGGTATGATCGGCTACAGCACATGGCAGACTGATACAGTGGACTTGAAGTCCCCAATAAGCCCCGCGGCGGCGACGGCAACGGCCACCTCTTGTTCTGATATCACTCTGGGGTTTCTCGAAGCAACGGCGACGACGAAGCCACTGCTTCAGAATCATCATCAGACTGCTGAAGCTGATGATGCAGAAAATCATAATCATAATGGTTCTATCTTGATGGATTCTTCTTCCTTGGAAATGATCATGGGCTGGAATCATTCTCTCTTTCGTAATTCTTCATTACAAAACCTAGATCAGAAGAGAGAGGTGTCTATGAAGAATCAATATTTATGTGGTGGAGGTGGTAATTTCTCAGTTGGGTCAACAGTTCCAGTTTCTTCGTCGTCGTCGTTGTGGCCGCCGCCATTTGCACACAATAATTCTTCAAGCTCAACGTTGATTCAGAGTCTTTATGATATTCCTCAGCCACAAGCACAGTCACTTTTCACCAACCCACCACCATCTTCCATGGCCTATTCTTCAAGTACACCAAATTATGATGCCATATCGAATTCCACTGATCAATTTACAATTAATACCACTTCTTCGTCTTCTTCTTCTTCATATAATAATAATTCCTTCTTGAAGTCTAATAATGGTGGTGGCTTGCACTTTTCTAACTGTACTCCTTTCTGGAATGCTTCTGCGGAAATATCTCATGTTTTTGCTCCTTCTTTAATCACTGAGAAGCCCAATTTCGCATGCCCTCTCATACCCAAGCCCAAGAGAGAAGAAGCTTCGGACTCGGCGAAGAAAAATCCGCTTGAACCTGCAATCAAGAAGCCAAGAATTGAAACCCCACCGCCATTACCAACTTTTAAGACTGATACTGCTTCCGTTCTTCACGAAGCCATTGAGTACATTAAGTTACTGCATGATCAAGTCAGTGTTTTGAGCACTCCTTACATGAAAAATGGAGTTCCCATCCAACACTGTCAACAGGGTTGTGATGTGAACAAGGAGGCATCGTCAGAAGGGCCAAACCAAGACTTGAGAAGCCGAGGGCTATGTTTGGTTCCAATTTCAAGCACATTCCCAGTCACAAACGAAACCCCTGTTGATTTCTGGACTCCATCATTCGGAGGCACACTGATCAGATAA 1305 0.4391 MGEEFEAGICGGNNYWWINNNMMMNSTTTRSVLPLMMSSSPCSVLTANNDLSSGGGGMIGYSTWQTDTVDLKSPISPAAATATATSCSDITLGFLEATATTKPLLQNHHQTAEADDAENHNHNGSILMDSSSLEMIMGWNHSLFRNSSLQNLDQKREVSMKNQYLCGGGGNFSVGSTVPVSSSSSLWPPPFAHNNSSSSTLIQSLYDIPQPQAQSLFTNPPPSSMAYSSSTPNYDAISNSTDQFTINTTSSSSSSSYNNNSFLKSNNGGGLHFSNCTPFWNASAEISHVFAPSLITEKPNFACPLIPKPKREEASDSAKKNPLEPAIKKPRIETPPPLPTFKTDTASVLHEAIEYIKLLHDQVSVLSTPYMKNGVPIQHCQQGCDVNKEASSEGPNQDLRSRGLCLVPISSTFPVTNETPVDFWTPSFGGTLIR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0870 434 MobiDBLite consensus disorder prediction 308 341 - -
Lele36g0870 434 CDD bHLH_AtbHLH_like 338 367 IPR045239 -
Lele36g0870 434 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 157 414 - -
Lele36g0870 434 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 336 379 IPR036638 GO:0046983
Lele36g0870 434 MobiDBLite consensus disorder prediction 309 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0870 Lele-ChrLele36 10082283 10085221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0870 274 434 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 45.026 1.72e-38 141