Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0856 ATGATTCTTACACATACAACTATACTTTTTCTTCTCTTCCCATTTTTCTTCATTATCTGTTTCCATACTCTGTTCTCACATGCAGCGAGTTCCATCACCCTAGACAAATTGATCAGAGACGGACCAGACGGTGATACTTTGCTCTCAGAAGATCTCACTTCCGAACTTGGATTCTTTAGTTTGGATAATAACAGCTCCTTGAGATACGTTGGAATTTGGTACTATAGAATTCCTGGAGCAGCATTCATATGGGTTGCGAACAGAGACAAACCCATCGAAGGCAGAGTAGGGGTTATAACTATTGGGAACGATGGGAATTTGGTCATCTTCGATGGAGATAAGAATCAAGTATGGTCGAGCAACATACCGAACCTCAAGAATAAGACAGAAGCTGTTCTTCGAGATGATGGAAACCTTGTTCTTTCTACCAAGGATGATGAAGAAGAGATATGGAAAAGCTTTGATCATCCAACCGACACGTTTCTTCCAGGTATGACCATACCAGTGAACCCTTCAAAGGGTGAGATTCGACCTTTTGTGTCATGGAAATCTAGCACAGATCCTGCTCGAGGAAATTTCTCAATGGGAATTGATCCACGAGCATCAACCCAGATTGTGATTTGGGAGGGAGAAAAAAGGAGGTGGAGAAGTGGGTATTGGGATGGAAGAATATTCACAGGAGTTTCAAACATGACAGGAAGTTATCTCTATGGATTCAGACTCAACACTGATGGAAATGGAGAAAGTCATTTAGCTTATACCCCACTGGAGAACACAGAGAAGGTGAGGTTTCAGATAGGTTGGGATGGGATTGAGAGGCAATTCAAATGGAACGAGGGTGAGAAACAGTGGAGCAGAACACAGGAAGAGCCATATAACAAATGTGAGTTTTATAACAAGTGTGGGAGTTTTGCAGAATGCAGTTTGGTTGCTCCAATGAAATGTGTTTGCATAAGAGGGTTCGAGCCGAAGGAAGTGGACGAGTGGACTACAGGGAATTGGTCTGGTGGGTGTAAGAGGATGATGCCATTGAAGGCTGAGAGGAATAATAACAGTAATAATGCTAGTTCTGTTGCTGCAACAGAAGTGGATGTTGAAGAAGATGGTTTCTTGCAGCTACAATGCAGGAAGTTGCCTGATTTTGCGACCTTGGTCGGTTCTCAGGACAAGAAAGAATGTGAGAGTTATTGCTTGCAGGATACGAATTGTACTGCATATACTTCTGTTAATAGAATTGGATGCCTGATTTGGCATGGTGAGTTGCTTGATGTTAAGGACTTTGAAGATGGAGGAGGAAATACACTCTATATTCGCCTTGCTCATTCTGATTTAGGTGATGGGAAGAAGAAGATCAAGATTGTGACAATAATTGGCATTGTTTTGGGGTTAATCTGTCTTGGTATATTTCTTTGGCTGGTGTGGAGGTTCAAGGGAAGAAAAGTAGCAACTGCAGCTTCCTGCTGTGAAACGAGCGATATTCCAGTTTTTGATGTTACAAGAAGCAAGAGTAGACAAGTTTCAGCAGAGTTTTCAGGATCAGCTGAACTGAGTTGGGATGGTCATGAACTAAGTGGACCAGAACTGCCATTATTCAATTTTAATTGTATTGCAATAGCTACAGACAATTTCTCAGAGGAAAATAAGCTTGGGCAAGGAGGATTTGGTCCTGTCTACAAGGGAATGCTTGGTGGCGGCGAGCAAATCGCAGTCAAGAGACTTTCAAGAAGATCTGGACAAGGTCTAGAGGAATTTAAGAATGAGATGATGTTGTTTGCCAAACTACAACATAGAAACCTTGCCTGGCATCTTTGTAACGAACACAAAGCAATGGAGCTTGTTGATCCTTCGGTTCGCGATTCGATTATAAGGAACCAGGTTTTGAGATGCATACATATAGGAATGTTGTGTGTGCAGGATTCAGCAGCTCATAGGCCAACAATGTCTTCTGTGGTATTAATGCTAGAAAGTGAGGCAACGAATCTTCCTTTGCCAAGACAACCTCTGCTTACTTCCATGAGAAGAAGATCAGAAGATAGAGACTTTTACATGGAAGGTCTTGATGTTTCCTTGAATGAACTTACAGTTACAATGGTTGTAGGAAGATAG 2106 0.4193 MILTHTTILFLLFPFFFIICFHTLFSHAASSITLDKLIRDGPDGDTLLSEDLTSELGFFSLDNNSSLRYVGIWYYRIPGAAFIWVANRDKPIEGRVGVITIGNDGNLVIFDGDKNQVWSSNIPNLKNKTEAVLRDDGNLVLSTKDDEEEIWKSFDHPTDTFLPGMTIPVNPSKGEIRPFVSWKSSTDPARGNFSMGIDPRASTQIVIWEGEKRRWRSGYWDGRIFTGVSNMTGSYLYGFRLNTDGNGESHLAYTPLENTEKVRFQIGWDGIERQFKWNEGEKQWSRTQEEPYNKCEFYNKCGSFAECSLVAPMKCVCIRGFEPKEVDEWTTGNWSGGCKRMMPLKAERNNNSNNASSVAATEVDVEEDGFLQLQCRKLPDFATLVGSQDKKECESYCLQDTNCTAYTSVNRIGCLIWHGELLDVKDFEDGGGNTLYIRLAHSDLGDGKKKIKIVTIIGIVLGLICLGIFLWLVWRFKGRKVATAASCCETSDIPVFDVTRSKSRQVSAEFSGSAELSWDGHELSGPELPLFNFNCIAIATDNFSEENKLGQGGFGPVYKGMLGGGEQIAVKRLSRRSGQGLEEFKNEMMLFAKLQHRNLAWHLCNEHKAMELVDPSVRDSIIRNQVLRCIHIGMLCVQDSAAHRPTMSSVVLMLESEATNLPLPRQPLLTSMRRRSEDRDFYMEGLDVSLNELTVTMVVGR 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0856 701 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 188 IPR036426 -
Lele36g0856 701 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Lele36g0856 701 CDD B_lectin 43 157 IPR001480 -
Lele36g0856 701 SUPERFAMILY Protein kinase-like (PK-like) 525 600 IPR011009 -
Lele36g0856 701 SMART ntp_6 365 439 IPR003609 -
Lele36g0856 701 Pfam D-mannose binding lectin 82 183 IPR001480 -
Lele36g0856 701 Pfam PAN-like domain 366 424 IPR003609 -
Lele36g0856 701 ProSiteProfiles Protein kinase domain profile. 543 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0856 701 PIRSF SRK 1 600 IPR024171 GO:0004674
Lele36g0856 701 PIRSF SRK 599 701 IPR024171 GO:0004674
Lele36g0856 701 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 154 - -
Lele36g0856 701 Gene3D Phosphorylase Kinase; domain 1 513 613 - -
Lele36g0856 701 Gene3D - 36 154 IPR036426 -
Lele36g0856 701 ProSiteProfiles Bulb-type lectin domain profile. 38 154 IPR001480 -
Lele36g0856 701 SMART blect_4 38 157 IPR001480 -
Lele36g0856 701 ProSiteProfiles PAN/Apple domain profile. 365 440 IPR003609 -
Lele36g0856 701 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 601 - -
Lele36g0856 701 CDD PAN_AP_plant 364 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0856 Lele-ChrLele36 9487461 9490990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0856 600 696 Receptor kinase-like Gene Family AT4G04510 37.113 8.35e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele36g0856 S_locus_glycop 5.8e-26 No_clan