Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0817 ATGGCTTCGTCTCAAGTCGATTTTGCTTCATCAACCTCGCCATTTGGTTGCATCAGTACGAGGAATCGTCGTAGTCTTCATCATCGAGTCACACAAGCCAAAGATTTATTCAACCATTTTATCAGAGACCACCTTAACAACAACAATAAGGCCAAGAACAACCTTGGAACCCTACGTTTTGCGTCCAACAACAAAAGAGATCAACAAGATGAGTCGTCGTCGTTGTCGGTGAGCCCTAACCATGAAGGACCATCACCGTCTTCGTCATCGTCGTCCCCGCCTTTAAGAAAACAAAAACCACCTCCTATTTCTGTTCCCTCGGATTTCTCATCACCCTGTGACGATGATGCCCAAAATCTTGGAGCTTCATCACTGGTTCAAATGTGGGAAAAGAGACTAACTCAATCATCATCAAACACAACGACCAAGTCGTCGTCAACTCCTAAATCTAGCCCTAGCACAACATCTTCATCATCACCAGAAAGTTCATCATCAGAAGAAGCAGTTTTATCATTATCAAAAATAGAAGCAGATTTATCACCACAAGGCCAGATTCAGAATCATGAGCAAGATCATCATCATCATCATCAACTGAGGGTGGCTGATATTATCAAAAGACTAACGGCGACGAGTGAAGAGACTGTGGATAACAATAATAATAATAATAATAATCAAGCTCAATATCATCAAAATTATTATTGTGTGGGATCTCCAGAACAACAATCATTATTAGAGAACAATGTTAGAAGAAGCTTTGTGATAAATTCACCAAGAATTAGAGGAAGACAAGCCTTTAATGATTTGCTTATGCAAATGGAACGTGATCGTCATGGCGAGCTCAATAATCTTGCAGATCGTGCGGCTGTTTCCAAGTTTTCTCATAGAGGTCGGATTCAGGCATTGCTTCGACTAAGACTAATGCAACCTGGCAAAGTGGCTAAGGATCCACGTGGCTTGCCATCATTAACAACATCACAAGTGATTAAGCAAGAGCAATTACCTCAAGGATCTGTAATTATGCGCCTAAGGGAAAGATTTAGCACAGGAATAAAAAAGGAATCTGCATCATCAATTGAAGCAGAAGTAGCTCATGAACCAAGAACTCCAAATAAAGAACAAGAAAACAAAGTCTCATCATCAATATATAATCCTCCAAATAACCCTACCCAAAACCCTGCGTTGTCCCATACAGATCATAATAACAAAGAAGAAGAAGAAGAAAAGGAAGAGGAAGAAGCACCTCGATTCTCAGATGTCTCGGTACCGTGCTCCGAGCGGGCTCAAAATGGAGAGACAAGTTCTTCTTCCATGACTGATCTGAATGTAGAGTCAGAGTTATCACAGAATGTTGAAGGAAGAGAAGAGAAGCATAATAACAATGCTTCTGATGAAACCAGTTATGATGAGATGGAAGAAGAAGAAGGAAGTGATGAAGATGAGTATGGTGAGAGAATGTATGATGAGATAGAAGAAGAAGAGGTAGAGAGAAGTGATGAGCAGATTTATGGTGAAGATAATAATTTTGATTGGATTACTCAGATTTCTAAACCTAGGAGCCATTGGGAAGATCTTAGGCAAGCTTGGTATAAGGAGGTGCTTGATAATGAATCGCAAAATAATGATGATATCTGCAAACTCCTTCAAAGAAGAACGGTGTCAAATTTTCTATGTAGTGATTTCCGAGAAAAAATGGACAGATTAATGGAGTCTCACAAAGGAACACAAACAAACCTATTGGCTAGTCCAGGAGATGACGAAGACGTCAACCTTCACGGGAAAATAGGGCAACTGATGGGATTTTTACAGAAAAAAATTAATCATAATCCTACAAAAGAAGAAGAAGCAGAAGAAGATGATGAAGATGAAGAAGAAGATGATGATGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAGAAAGAGGAAGAAGAAGAGGAGATACTGATAAGTGGTTACCAGTCATCATCATCACCATCACAATGGCGTTACGGTGATGATTCTGCATCCTTAACACAACCTTCTCAATCTCCATCTTTATTTCACAATACTCACGGAAAGTACTGTTCGTCCACCAATCATCCTCCTATTCTGTACCAAGAGATGTCTCAGTTAAGGAAATCAATAAGAAGCTGCATAGATATGCAGACGAACTTACAAAAATCACTAAATCGAGAGAATCATACAGCTAAGGGAAAGAAGTCCCATGATAGAGTATTGAAGAAAGGAAACTGTTGTATCTGCTCAAACGTGAAAGCTGATTCACTTTTCTACAGATGTGGCCATATGTGCACGTGCCTAAAATGTGCCAATGAGTTACAATCGAAGAATGGGATGTGTCCAATCTGTGAGGCTCCAATAGCTGATGTTGTTCGAGTTTATGTTGATGCTTAG 2406 0.3994 MASSQVDFASSTSPFGCISTRNRRSLHHRVTQAKDLFNHFIRDHLNNNNKAKNNLGTLRFASNNKRDQQDESSSLSVSPNHEGPSPSSSSSSPPLRKQKPPPISVPSDFSSPCDDDAQNLGASSLVQMWEKRLTQSSSNTTTKSSSTPKSSPSTTSSSSPESSSSEEAVLSLSKIEADLSPQGQIQNHEQDHHHHHQLRVADIIKRLTATSEETVDNNNNNNNNQAQYHQNYYCVGSPEQQSLLENNVRRSFVINSPRIRGRQAFNDLLMQMERDRHGELNNLADRAAVSKFSHRGRIQALLRLRLMQPGKVAKDPRGLPSLTTSQVIKQEQLPQGSVIMRLRERFSTGIKKESASSIEAEVAHEPRTPNKEQENKVSSSIYNPPNNPTQNPALSHTDHNNKEEEEEKEEEEAPRFSDVSVPCSERAQNGETSSSSMTDLNVESELSQNVEGREEKHNNNASDETSYDEMEEEEGSDEDEYGERMYDEIEEEEVERSDEQIYGEDNNFDWITQISKPRSHWEDLRQAWYKEVLDNESQNNDDICKLLQRRTVSNFLCSDFREKMDRLMESHKGTQTNLLASPGDDEDVNLHGKIGQLMGFLQKKINHNPTKEEEAEEDDEDEEEDDDDDDDEEEEEEEEEEEEEKEEEEEEILISGYQSSSSPSQWRYGDDSASLTQPSQSPSLFHNTHGKYCSSTNHPPILYQEMSQLRKSIRSCIDMQTNLQKSLNRENHTAKGKKSHDRVLKKGNCCICSNVKADSLFYRCGHMCTCLKCANELQSKNGMCPICEAPIADVVRVYVDA 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0817 801 MobiDBLite consensus disorder prediction 373 396 - -
Lele36g0817 801 Coils Coil 628 655 - -
Lele36g0817 801 MobiDBLite consensus disorder prediction 613 653 - -
Lele36g0817 801 MobiDBLite consensus disorder prediction 607 690 - -
Lele36g0817 801 MobiDBLite consensus disorder prediction 350 484 - -
Lele36g0817 801 ProSiteProfiles Zinc finger RING-type profile. 749 788 IPR001841 -
Lele36g0817 801 SUPERFAMILY RING/U-box 748 793 - -
Lele36g0817 801 MobiDBLite consensus disorder prediction 64 119 - -
Lele36g0817 801 MobiDBLite consensus disorder prediction 357 372 - -
Lele36g0817 801 MobiDBLite consensus disorder prediction 465 484 - -
Lele36g0817 801 PANTHER BNAC05G24000D PROTEIN 1 800 - -
Lele36g0817 801 MobiDBLite consensus disorder prediction 64 94 - -
Lele36g0817 801 MobiDBLite consensus disorder prediction 654 690 - -
Lele36g0817 801 MobiDBLite consensus disorder prediction 422 447 - -
Lele36g0817 801 Pfam Zinc finger, C3HC4 type (RING finger) 746 794 - -
Lele36g0817 801 MobiDBLite consensus disorder prediction 134 170 - -
Lele36g0817 801 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 724 800 IPR013083 -
Lele36g0817 801 MobiDBLite consensus disorder prediction 448 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0817 Lele-ChrLele36 7127376 7133229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0817 749 797 C3H Transcription Factor Family AT3G06140 36.735 8.11e-06 47.0