Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0803 ATGGCGGGTCGGTTCGGATTTGGTTCCGCCGCTTCGACATCCATGATCGTCATATACACGCCTACGCCGGACCTCGCCTTCACCAATCTTGCCTTCTGTTCCCCTTCTGATCTTCAGAAGTTCGCTGTCTCTGGTTACAGAAACCTCTTCCTGGCTTTGATTGACGATTCCTTTGTTGTTTCTCTTGCATATCCTTTTCGAATTTTCGGAAATTCAATCACAATTTTACGTCTTCCATTTATCATAATTGGTGGCCATATTGCACTTAACTCCGTTCAACGTCGGTTTGTCAAAGTTTCTGCTGCTGAATCCATATCTGTGAGCAGATTTACCCCACCAGAGAACTTCAACCTTGCGGTGTTAACAGTTGAGCTGGACTTTTTTGAAAGGGGAAACAGAAGTGAACAAATTGATGCTGTTCTTCTGTCCAAGCAACTTAAAAAGAGATTTATAAATCAGGTAGCATCTTTTAGTAAGTTAATTATGCCTGTTAGTTGGCTAGCCTTGATTATGACAGCTGGGCAGAAAGTAGTATTTGGGTTCGATGGAAATAATTATCACTTCACTGTCAGTCGAGCAGTTGTTGAGGGCCAAGAAAAGTCTAATTTTCTTGAGAGAGGGATGATTTCAGATGACACATACATCATTTTTGAAGCATCCCGTTACAGTGGAATTAAGATTATCAATCAGCGTGAGGCTGCCACTAGCAACATTTTTAAGCAGAAAGAGTTGAATCTTCAGTCTTTGGGTATTGGAGGTCTGAGTGCGGAATTTGCAGATATATTTCGAAGAGCTTTTGCTTCTCGTGTTTTTCCTTCTCATGTGACATCCAAGCTAGGTATCAAGCATGTGAAGGGAATGCTGCTTTATGGGCCTCCTGGTACTGGAAAAACTCTAATGGCACGTCAAATAGGAAAACTTTTGAATGGAAAGGAGCCGAAGATTGTCAATGGCCCTGAAGTCTTGAGTAAATTTGTTGGTGAAACTGAAAAGAATTTGAGGGACCTCTTTGCTGATGCTGAACAAGATCAGAGGACCAAAGGGGATGAAAGTGATTTGCATGTCATAATTTTTGATGAAATTGATGCTATTTGTAAGTCAAGAGGTTCAACTAGGGATGGTACTGGAGTTCATGATAGTATTGTGAACCAACTTCTTACTAAGATAGATGGTGTGGAATCACTGAATAGTGTTTTGCTTATTGGAATGACCAACAGAAAAGACATGCTTGATGAAGCTCTTTTAAGGTGA 1251 0.4093 MAGRFGFGSAASTSMIVIYTPTPDLAFTNLAFCSPSDLQKFAVSGYRNLFLALIDDSFVVSLAYPFRIFGNSITILRLPFIIIGGHIALNSVQRRFVKVSAAESISVSRFTPPENFNLAVLTVELDFFERGNRSEQIDAVLLSKQLKKRFINQVASFSKLIMPVSWLALIMTAGQKVVFGFDGNNYHFTVSRAVVEGQEKSNFLERGMISDDTYIIFEASRYSGIKIINQREAATSNIFKQKELNLQSLGIGGLSAEFADIFRRAFASRVFPSHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKLLNGKEPKIVNGPEVLSKFVGETEKNLRDLFADAEQDQRTKGDESDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNSVLLIGMTNRKDMLDEALLR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0803 416 PANTHER VESICULAR-FUSION PROTEIN NSF 13 416 IPR039812 GO:0016887|GO:0035494
Lele36g0803 416 ProSitePatterns AAA-protein family signature. 398 416 IPR003960 GO:0005524|GO:0016887
Lele36g0803 416 Pfam ATPase family associated with various cellular activities (AAA) 287 416 IPR003959 GO:0005524|GO:0016887
Lele36g0803 416 SUPERFAMILY ADC-like 12 110 IPR009010 -
Lele36g0803 416 SUPERFAMILY Cdc48 domain 2-like 113 232 IPR029067 -
Lele36g0803 416 FunFam Vesicle-fusing ATPase 1 240 416 - -
Lele36g0803 416 Gene3D - 11 110 - -
Lele36g0803 416 Gene3D - 227 416 IPR027417 -
Lele36g0803 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 262 416 IPR027417 -
Lele36g0803 416 Gene3D - 113 226 - -
Lele36g0803 416 CDD AAA 285 416 - -
Lele36g0803 416 SMART AAA_5 283 415 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0803 Lele-ChrLele36 6892915 6897393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0803 278 416 Calmodulin-binding Proteins AT3G56690 41.259 2.13e-26 110