Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0771 ATGCTTGAATTAATCAAGAATATTGTCCACAAGATGAGTACTGATTCTGTTGGGGGCCGTTCTCCTAGAAGTCATAGGCGAAGGGATGCTGTGTTGGACATTGATCTTAATAGGGCTCCACCTGGTTCTATTCAGGAGCAAGAGGGACCTTCAATTCTATCAGAATCTCGTGTAGTTCAAGCTTCCCAGCAACCACAGTTTATACAGCCTATTGATGTGGAGCCTATTGATGATGATGTTATTGAATCTACACGAAGTGCTTTTGTTGAGATTGTGATGTTTTCTGAAATTGTATCGCTGAGAATTTTGGATATTCTAGGATGTGGTATTGATAATGTGAGTCGGATGACTGAAATTTTTCCCAACAATCGCAGAAGAGATTCTTTGTACCAAACAGTTCCTAGTTATGATCTGTATATAAACGTGGAAGGCAGTAGCAATTCTGAGTGTTCTTGTAAGCGTGTTGTTCTTATTGTTGTTGTGATTGGTAAATGGCTATGCTTTATCCTGGGAGGAAATATAAAGTCAGCTGAACCTCCAAAAGAGCCTGTGTTTAATTGTCCAATATGTAGAAAACCATTTGTGGAAGAAATGTTGACAAGGTGTGGTCATATCTTTTGTAAGAAATGCATTAAGGCTGCTATAAAAGCACAAGGTAAATGCTCTATATGTGGCCAAAAGATTACTGCAAGAGGCCTTATAAGGGTGTTTCTACCATCAACTAGTACTTCTTAA 735 0.3878 MLELIKNIVHKMSTDSVGGRSPRSHRRRDAVLDIDLNRAPPGSIQEQEGPSILSESRVVQASQQPQFIQPIDVEPIDDDVIESTRSAFVEIVMFSEIVSLRILDILGCGIDNVSRMTEIFPNNRRRDSLYQTVPSYDLYINVEGSSNSECSCKRVVLIVVVIGKWLCFILGGNIKSAEPPKEPVFNCPICRKPFVEEMLTRCGHIFCKKCIKAAIKAQGKCSICGQKITARGLIRVFLPSTSTS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0771 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 173 239 IPR013083 -
Lele36g0771 244 ProSitePatterns Zinc finger RING-type signature. 202 211 IPR017907 -
Lele36g0771 244 Pfam zinc-RING finger domain 186 226 IPR001841 -
Lele36g0771 244 PANTHER ELFLESS, ISOFORM B 12 242 - -
Lele36g0771 244 SUPERFAMILY RING/U-box 182 237 - -
Lele36g0771 244 SMART ring_2 187 224 IPR001841 -
Lele36g0771 244 ProSiteProfiles Zinc finger RING-type profile. 187 224 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0771 Lele-ChrLele36 6335808 6338720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0771 12 241 C3H Transcription Factor Family AT5G48655 40.773 5.45e-33 117