Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0767 ATGAATGTTCAAGAAGGTGGTAGTGGAGACGGTGGTGGAGGAGGGGGAGGAGAGGTGAATAACCAAGTTCAGCTTCAGCCGCCGCCACAGCCTCCCCCGTGTCAGAGATGTCCTCGTTGTGACTCTGTGAACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCGCAGCCTCGGTACTTCTGCAAAACGTGTAAGAGGTACTGGACCCATGGTGGATCCTTGCGAAACATACCCATCGGTGGTGGTTGCCGGAAGGGAAAGCGGACCAAAGCGTCGTCGGCTTCGTCCTCATCGGCTGCCCTGCAGCGGATGAGCCGTCCACAACAGCTGCAACAACCTCGGCTGCAAGAGGTGATCCCTACTCAACCGAACCTGATGATGTCGCCTCCACCCGTTCTCGTCGGTGGTCGTTCTTCTGCGGTGGCGGCACCTCCGGTGGTCCCTTTGATAAGTTCCTCCAATCAAGGTCGTGGGTATCAATCATCTCTGGCGGCGATTCACTCCCAAAACCCATTATCACAACCGTTATTCGATCTGTCGTTTCTGAATCTTGGTCCTTCCAATCTGGGTCACCTTCCTTGGTTCAATGCTCCTTCGACTCAGTCCTCAAAGGTCCATACTCCTCCGTTGTCACCGGTGGTGCTCCAATCGGGAAACAGAAGCAGGGAGGTAGAATCTTTGTACGCATCTGATCATCAAGGTCTGGTTCAAACGAGCATGATGATGATGAATATGGGTAACAGTAGTTTCGCTTCTCTTCATGATTGGTCTAAAAACTCTCTGTGGAGTACCGTAAGCACAACTTCCATTGGAGACAATTCTGGGAATACCAGTAATAATGATGATAATAGTTATGATAATAACGCTAAAGCTGGATCATCATCTTCTCCGAGTGGAAATAAATGGCCTGATGACCTACCCGGGTTTGGTCCTCCTCCATGA 945 0.5079 MNVQEGGSGDGGGGGGGEVNNQVQLQPPPQPPPCQRCPRCDSVNTKFCYYNNYSLSQPRYFCKTCKRYWTHGGSLRNIPIGGGCRKGKRTKASSASSSSAALQRMSRPQQLQQPRLQEVIPTQPNLMMSPPPVLVGGRSSAVAAPPVVPLISSSNQGRGYQSSLAAIHSQNPLSQPLFDLSFLNLGPSNLGHLPWFNAPSTQSSKVHTPPLSPVVLQSGNRSREVESLYASDHQGLVQTSMMMMNMGNSSFASLHDWSKNSLWSTVSTTSIGDNSGNTSNNDDNSYDNNAKAGSSSSPSGNKWPDDLPGFGPPP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0767 314 MobiDBLite consensus disorder prediction 270 314 - -
Lele36g0767 314 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 264 IPR045174 GO:0003700|GO:0006355
Lele36g0767 314 MobiDBLite consensus disorder prediction 90 113 - -
Lele36g0767 314 MobiDBLite consensus disorder prediction 270 302 - -
Lele36g0767 314 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Lele36g0767 314 MobiDBLite consensus disorder prediction 80 113 - -
Lele36g0767 314 MobiDBLite consensus disorder prediction 1 36 - -
Lele36g0767 314 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Lele36g0767 314 Pfam Dof domain, zinc finger 35 89 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0767 Lele-ChrLele36 6290695 6291639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0767 29 97 C2C2-Dof Transcription Factor Family AT5G60200 75.714 8.50e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele36g0767 zf-Dof 2.7e-31 No_clan