Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0738 ATGGGGGGTTTGATCGATCTCAACACTACGGAGGACGATGAAACGCCGTCGTCTCTCTCGTCGGCGGCTTCTTCTTCGTCCTCTCACTCGGGTGTTGTAACTACTACAATTACTACTTCGGCCCCTTCTCCTTCTTCTAACGCTGTGTGCTTGGAGCTATGGCACGCATGTGCGGGTCCAATGATATCATTGCCTAAGAAAGGAACCGTTGTTATGTACTTCCTCCAGGGCCACATGGAACAGCAGCTTCAGGATTTTTCGGTCGATGCCTGTAATATCAATTTCCCATCTCATATTTTCTGTCGCGTACTTGATGTTAAGCTCCATGCGGAGGAAGGGAGCGATGAAGTGTATTGCCAGGTCTCGTTGGTTCCTGAGAGAGCGCAAGTGGAACGAAAACTGCCAGAAGGAGAACTCGATGCTGATGGTGAAGAGGAGGATGCTGGTGCTGTGGTGAAGTCCACGACACCCCACATGTTCTGCAAGACTCTGACAGCTTCTGATACTAGCACTCATGGTGGATTTTCTGTGCCCCGTCGAGCTGCTGAAGATTGCTTCCCTCCCCTGGATTACAGCCAACAGAGACCTTCACAGGAGCTTGTAGCAAAGGATCTGCATGGCCTGGAATGGAGGTTCCGGCATATTTACAGAGGTCAACCAAGGAGGCATTTACTCACAACTGGATGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGTTGTTTCTTAGGGCTGAGGATGGAGAACTGAGATTGGGAATTCGTAGGGCTGCTCAATTAAAGAGTGGTGGTACTTTATCAGTGCCATCTGCTCATCAGTTGAATCCTAGCACTCTCATGGATGTGATTAATGCTTTATCCACAAAATGTGCATTTAATGTGTATTATAATCCCAGGGTTAGCTCATCAGGATTCATAATACCCCTTCACAAATTCTTGAAGAGCCTTGATCATTCATATTTGGTTGGAATGAGGTTCAGGATGCGTGTTGAAACTGATGAAACTACAGAGAGAAGGTGCAATGGATTAATTGTGGGAATGAGTGATGTAGATCCTATTAAGTGGCCTGGATCAAAATGGAAATGCTTGGTGGTCAGATGGGATGACATGGAAGCCCCTAAGCATAATAGGGTTTCCCCTTGGGAGATCGAACCATCTAGTTCTGCTCCCAATTCCAATAATTTCATGGCAGCTAGTTTTAAGAGGAACAGGATTGGTCTGCCGTCAGAAAAGGCCGAATTACCAGTTCTGAATAGGATTGGAGGATCAGACTTTGGAGAATCATTGAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATATTGGGCATTAATACCCCATATGTTGGTATCAATGCTCAGAGTCACCAATTATCTGAAATTAGGTGCTATCCTGGTTCAAACTGTTCCAGAATTGTAACAACTGGAAATAATGTCAGGGTCCCACAAGCGAGTTCTGACATGTCATGCTGTGGCATAGGCTGTAGTGAATCTTCACGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATACAGAACCTTGTCTGTTAATGAGGCTCATAAAAATGGTTGCTTTGGAATCTTTGATGGTTGTCAATTGCTGGGATACAGAAATCAATGTTCTACCCGGATGGTGGACAATTCTTCCCATATGCATCCATCTGGGCCAGTTTCATCTCCATCATCTGTTCTGATGTTCCAGCAAGCAGCCAATTCAGTTTCCAACTTTGATTATGGGAATAAAAGTAATCAAGAGATGGAGAGAAAAATGCACTACCTAGGTTCGTATGCTTCTGAAGTGAAAAGTAGAAAATTAGCACAATCACCATCTTACGAGCCTGGTCACTTTGGGCAAGCTGAGGAAGGAACAAATTCCTTTGGTACGTCAAATTTTCATAATCATCTGGTCACAGTAAGTTCAGATGATTCTCTTTTGCCACTGACAGGTAGCCCAGAGTTCGTTTCCACATGTAAAAGTAGCTGCAGACTCTTTGGTTTTTCATTGACGGGGGAAAATCATATTGCCCGTGAAGAAGCAGGCTCTTCTACAGTCACTTGTCAATTAAATTCTGGACCTTCCTTTATAAGACATGTTGGGGATGAACTTCCACTAGGCATTCACTCAGAAGCAAGGCAGCTGGAAGCAACAGTGCCAAAGGAGTACTGCGGTATGGACTAG 2202 0.4487 MGGLIDLNTTEDDETPSSLSSAASSSSSHSGVVTTTITTSAPSPSSNAVCLELWHACAGPMISLPKKGTVVMYFLQGHMEQQLQDFSVDACNINFPSHIFCRVLDVKLHAEEGSDEVYCQVSLVPERAQVERKLPEGELDADGEEEDAGAVVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRAEDGELRLGIRRAAQLKSGGTLSVPSAHQLNPSTLMDVINALSTKCAFNVYYNPRVSSSGFIIPLHKFLKSLDHSYLVGMRFRMRVETDETTERRCNGLIVGMSDVDPIKWPGSKWKCLVVRWDDMEAPKHNRVSPWEIEPSSSAPNSNNFMAASFKRNRIGLPSEKAELPVLNRIGGSDFGESLRFQKVLQGQEILGINTPYVGINAQSHQLSEIRCYPGSNCSRIVTTGNNVRVPQASSDMSCCGIGCSESSRFQKVLQGQEILPSQPYRTLSVNEAHKNGCFGIFDGCQLLGYRNQCSTRMVDNSSHMHPSGPVSSPSSVLMFQQAANSVSNFDYGNKSNQEMERKMHYLGSYASEVKSRKLAQSPSYEPGHFGQAEEGTNSFGTSNFHNHLVTVSSDDSLLPLTGSPEFVSTCKSSCRLFGFSLTGENHIAREEAGSSTVTCQLNSGPSFIRHVGDELPLGIHSEARQLEATVPKEYCGMD 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0738 733 MobiDBLite consensus disorder prediction 1 45 - -
Lele36g0738 733 CDD B3_DNA 158 260 IPR003340 GO:0003677
Lele36g0738 733 Pfam B3 DNA binding domain 160 261 IPR003340 GO:0003677
Lele36g0738 733 MobiDBLite consensus disorder prediction 10 45 - -
Lele36g0738 733 SMART B3_2 160 262 IPR003340 GO:0003677
Lele36g0738 733 FunFam Auxin response factor 323 394 - -
Lele36g0738 733 Pfam Auxin response factor 287 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele36g0738 733 Gene3D - 324 396 - -
Lele36g0738 733 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 47 684 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele36g0738 733 ProSiteProfiles B3 DNA-binding domain profile. 160 262 IPR003340 GO:0003677
Lele36g0738 733 Gene3D - 158 262 IPR015300 -
Lele36g0738 733 FunFam Auxin response factor 158 262 - -
Lele36g0738 733 SUPERFAMILY DNA-binding pseudobarrel domain 153 267 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0738 Lele-ChrLele36 5744524 5752481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0738 45 513 B3 DNA Binding Superfamily AT5G60450 49.896 2.53e-146 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele36g0738 B3 2.9e-22 CL0405