Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0726 ATGTTATGGAGAAACAGATGGACTTTGTTGACAGTGTCAAACCAAATTATCAGAACACTGCCTTCCGTTTCATTTTGCTATCGTTCTTGGCCATTTCCAAGTGAAACTAGTCAAACTAAGAAGTTTTCTTGCAACATTTCTGATTCAGAATTTCCTCAGAAAGGCAAGCAACTTTTGAATGGTCAGATCATATGTTCCACTTTATCAAGCTGCCCATCTGATTTAATTTCTTTGAGCTTCTTTATGTGGTGTGCCCAACAACCCGATTACTTTCATGATGTGGCAGCATTTGATTGCATGGTTGATGTGGTTCGACACCTCACTAAACAGTATAAAACAGTCAAAGGAATTGTGCTGGAATTGGAGACTGTTGGGTGTATTATGAAGGCAAAAGTTTTTTTGCTTTTATTGAGAATTTATTGGCATGGAGGAATGTATGACATGGTTTTTGAGGTGTATGAGCACATGATAAGTTGTGGGTTTACACCTAACACATTTGCAAGAAATGTAGTAATGGATGTTCTATTTAAGATTGGAGAAACTGATAAAGCTTTGAAGTTTTTAAAAGAGACTCAGGCCCCAAACTTCTTGACCTTTAATATTGCACTGCTTCATCTTTCTAAGTTAAACGAAGTTGAACTTATTAGTCATGTATTTAAAGTTATGTTAAGGATGCGGTATTATCCTAATGCTAGGACATTTGAGATACTTCTCAATTGTTTTTGCAAGATGAATAGGTTTGCAGAAGCATATCAAGTTTTGGGTCTCATGGTCTCTTTTGGGATCACAATGTCCTCAAAAGTTTGGACTATACTTATCAACGGCTTTTGTAAGCAGCATAGACTTGTTTTCGCTAGCAATCTGTTGAAGAAGATGATTGATTCTGATTGTTCTCCTAATGTTGTGACATATACCACTTTGTTCAAGGCTTTTATGGAATCCAAAATGATTGCTGATGCTTCTGGGTTGTTAGATACCATGGTTTCAAGAGGCCAAAATCCTGATATAATTCTTTATAATGTCTTAATTGATTGCCTTTCAAAGGCTGGAATGTACCAAGATGCTATTAATGTCTTTTTAAGTTTGTCGAAACAAAATATAGCACCTGATTCTTATACTTTTAGTTCATTGTTGTCTACAATATGCCTTTCTAGAAAGTTTAATCTTTTATCCAAACTGGTTTGTGGACATATCGCAGATGCTGATCTAATATTCTGCAATGCACTTCTAAATTCTTTCTGTAAGGCTGGGTTTCCATCTCTTGCTGTGGAATTATACAATTATATGATCGATAGAGGTTTTTCACCGGACAAGTATACTTTTTCTGCATTACTTTGTGGACTTTGTGGTGCAAGAAGAATTGATGAAGCATTAAATGTGTATCGTGGTATTGTTATGACTTGTAATGATGTTGATGCTCACATCCATACCGTGTTAATAGATGGGCTTATAAAAATGGGTAAATATCACACGGCTATTAAAATGTTCAAAAATGCAATAAAGGAGAAATATCCACTTGACAGTGTATCATATACAGTTGGTATGTGTGGATTTCTTAGAGGTGGAAGAACTCAAGAGGCATGTACGTTGTATGACAGAATGAAGGACAATGGCCTGACACCTAATGTTCTTATATGTAATATGATGCTGTCAGCTATTTGTAAAGAAAAAGATCGTGAAATGGTCAATTGGATGCTACAAGAGATGATTGATTTGAGGATAGAGCTTAGGGACACAAGTTTCTTAAACTTATGTAAATATTTAAGAGTTTCAAACACTTATCTTTCATCTTTTCAGTTGTTGGCTGAGATGAAAGTCTTGGGCTTAATACCTGCCAAGGCATTGCGTGATTCAAGTTTTGTTGGACATGCTAAAGGTGCAAAAGCAACTTACGAATACTATAGAAAAGCTTTTACGGACTGTAATATGGACCTAGATTCATCTAGTTCTGAAGATCTCTGCGATGTGATTGCTGCAGTTTGATTGTACTCATTTGATCCAACAAGATGGAAATACATGATTGAAGATCAATCACAGAATACAGCTTTACATCGTCCTCTTCCTCTGGGCTGTTTATCATCTCTGGTCACCTCCTGTAGCCCAACCCTGTTATCTGTGTTTGTCTCTGGCAACCTGATCTTGTGCTTGTTTGTGTCCTCTAACTGTTTTGACTGTGCTCATCCAGTGGTGATAAGAATACTACAAAGGGAAACTGCTTTAATCATTTCTTTAGAAATATTTGCTATAGCCCATCATGACAAATGTTTTTGTCACTGCTTGCTTCTGTTCAACATCATGCACCGGCAGATAAGTCAGTGGACGCTTTTTGCTGACTTGGAACAGGGCAAAGTCTCATTTATTAAGTTCAAATCCTATGATATTCACTTCCATCTTAAGCTTTTGGTCTTGTTTCAAGAACTGTTGAGTTATGGGCCAACGATACACAGTGATTCTTCTGCTGTTGCTTCTGTTCCAAGTTCTGGTTCTGGCTGTAGCAGCACAGAACTCAAATATAGACTATTGTATGATCTGGAAAATGAAAAACCTGAACCAAAGGAAAAAGAGTCTGTAAGTTGCTTGTCTGATTGCTTCAAAGAGAATTGCAAGCTTAGTCTCATGATGTTGATCATTACTGCTTTATCATCTCTCACTGAATTTTGGGAAAACAAGCCACCGAGTTGGGTGGGCACAGATCCTTGTGATGGTAGTTGGGAAGGCATTGACTGTACCAATTCAAGAGTGACCTCAATAGCTCTTAATCTTAATCGGTTGGGCGGCAACATTCCACGTACGTTTGGAAATCTGTCCAATGTTAATTGGCTAGATATTGCAGACAACCAGATTGAAGGACCTATCCCAGTCTCTGATGAAGAAGGACCTGGTCTTGACATGCTACACAAAACAGAGCACTTACGCTTTGATCACAATCAAATGAGTGGCGAAGTGCCTTCAAGTATCACAAATCTCACAAAACTCACTGATCTGAATTTAGGCAACAATAATCTAAATGGCTCTATGCCTGATCTTACTGGAGTAAATACACTTACCTCTGTATCATTGGAAGACGCCGGACTGCAAGGGGAAATACCTGACACCTTATTTAGCCAGTCTAATATAGAGACTGTGATACTGAGGAATAATCAGCTCAATGGTACATTGGATGTTGGCAACTATAAATCCAATTTAGATCTTATTGATTTGGAGAATAATAAGATAACTGACTTTGCTCAGAGAAGTGAAAAAATCAGTTTTGAAGTCATAAGAAAAGAGCAAAGGAATTTAATCCTTTCGTCCATTCATCATTCATATAAGGTTTACCAAGCTGTTCTTCCCTCTGGTGAACTGGTCGCCGTCAAGCGTGCTTCACAAGAATCTATACAGGGTGCTGTTGAGTTCAAAACTGAGATTGAGCTTCTATCAAGGGTCCATCACAAGAATCTTGTGCGTCTTGTGGGTTTCTGTTATGATAAAGGTGAACAAATGCTGGTGTATGAGTATATTCCTAATGGCACTATAATGGACAGTCTTTCAGCAGACCTGGACTTATATTCTTCATTCTTGCAGGGGTATATGGATCCTGAATACTACATGACTCAGCAGTTATCAGAAAAGAGCGATGTTTATAGCTTTGGAATTACGATGCTTGAACTGGTAACAGCAAGGAAGCCAATAGAGCAAGGAAAATTCATTTTAAGAGAGGTTCAAAGGGTAATGGATAGATCAAAAGAGTTATACAATCTTCTTCCCATTATAGATCCAATCATAAAGCAAGAAGGAACCCCAAAAGGTTTAGAGAAGTTTGTGGACATAGCATTGAAATGTGTCAAAGATCATGCAGAAGAGAGGCCAACAATGGCTGATGTTGTGAAAGAGATTGAGAATATAATGCAACTTGCTGGTTTCAACCCCAATGCTGAATCAACATCAACATCAGAATCTTATGACTATGCCAGTGGTGGGAAGATCAACCATCCTTATGTCGATGAAGATTTCGCCTACACCGGCGGTTTCCCATCAGTAAAGGTGGAACCTCACTAA 4038 0.3796 MLWRNRWTLLTVSNQIIRTLPSVSFCYRSWPFPSETSQTKKFSCNISDSEFPQKGKQLLNGQIICSTLSSCPSDLISLSFFMWCAQQPDYFHDVAAFDCMVDVVRHLTKQYKTVKGIVLELETVGCIMKAKVFLLLLRIYWHGGMYDMVFEVYEHMISCGFTPNTFARNVVMDVLFKIGETDKALKFLKETQAPNFLTFNIALLHLSKLNEVELISHVFKVMLRMRYYPNARTFEILLNCFCKMNRFAEAYQVLGLMVSFGITMSSKVWTILINGFCKQHRLVFASNLLKKMIDSDCSPNVVTYTTLFKAFMESKMIADASGLLDTMVSRGQNPDIILYNVLIDCLSKAGMYQDAINVFLSLSKQNIAPDSYTFSSLLSTICLSRKFNLLSKLVCGHIADADLIFCNALLNSFCKAGFPSLAVELYNYMIDRGFSPDKYTFSALLCGLCGARRIDEALNVYRGIVMTCNDVDAHIHTVLIDGLIKMGKYHTAIKMFKNAIKEKYPLDSVSYTVGMCGFLRGGRTQEACTLYDRMKDNGLTPNVLICNMMLSAICKEKDREMVNWMLQEMIDLRIELRDTSFLNLCKYLRVSNTYLSSFQLLAEMKVLGLIPAKALRDSSFVGHAKGAKATYEYYRKAFTDCNMDLDSSSSEDLCDVIAAVXLYSFDPTRWKYMIEDQSQNTALHRPLPLGCLSSLVTSCSPTLLSVFVSGNLILCLFVSSNCFDCAHPVVIRILQRETALIISLEIFAIAHHDKCFCHCLLLFNIMHRQISQWTLFADLEQGKVSFIKFKSYDIHFHLKLLVLFQELLSYGPTIHSDSSAVASVPSSGSGCSSTELKYRLLYDLENEKPEPKEKESVSCLSDCFKENCKLSLMMLIITALSSLTEFWENKPPSWVGTDPCDGSWEGIDCTNSRVTSIALNLNRLGGNIPRTFGNLSNVNWLDIADNQIEGPIPVSDEEGPGLDMLHKTEHLRFDHNQMSGEVPSSITNLTKLTDLNLGNNNLNGSMPDLTGVNTLTSVSLEDAGLQGEIPDTLFSQSNIETVILRNNQLNGTLDVGNYKSNLDLIDLENNKITDFAQRSEKISFEVIRKEQRNLILSSIHHSYKVYQAVLPSGELVAVKRASQESIQGAVEFKTEIELLSRVHHKNLVRLVGFCYDKGEQMLVYEYIPNGTIMDSLSADLDLYSSFLQGYMDPEYYMTQQLSEKSDVYSFGITMLELVTARKPIEQGKFILREVQRVMDRSKELYNLLPIIDPIIKQEGTPKGLEKFVDIALKCVKDHAEERPTMADVVKEIENIMQLAGFNPNAESTSTSESYDYASGGKINHPYVDEDFAYTGGFPSVKVEPH 1345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0726 1345 SUPERFAMILY HCP-like 334 542 - -
Lele36g0726 1345 Pfam PPR repeat 228 257 IPR002885 -
Lele36g0726 1345 Gene3D Ribonuclease Inhibitor 876 956 IPR032675 -
Lele36g0726 1345 Gene3D Ribonuclease Inhibitor 957 1010 IPR032675 -
Lele36g0726 1345 SUPERFAMILY Protein kinase-like (PK-like) 1104 1300 IPR011009 -
Lele36g0726 1345 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 335 369 IPR002885 -
Lele36g0726 1345 Gene3D Ribonuclease Inhibitor 1011 1093 IPR032675 -
Lele36g0726 1345 Gene3D Phosphorylase Kinase; domain 1 1101 1167 - -
Lele36g0726 1345 TIGRFAM PPR: pentatricopeptide repeat domain 406 437 IPR002885 -
Lele36g0726 1345 TIGRFAM PPR: pentatricopeptide repeat domain 439 463 IPR002885 -
Lele36g0726 1345 TIGRFAM PPR: pentatricopeptide repeat domain 509 543 IPR002885 -
Lele36g0726 1345 TIGRFAM PPR: pentatricopeptide repeat domain 338 371 IPR002885 -
Lele36g0726 1345 TIGRFAM PPR: pentatricopeptide repeat domain 233 264 IPR002885 -
Lele36g0726 1345 TIGRFAM PPR: pentatricopeptide repeat domain 302 335 IPR002885 -
Lele36g0726 1345 TIGRFAM PPR: pentatricopeptide repeat domain 268 301 IPR002885 -
Lele36g0726 1345 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 129 163 IPR002885 -
Lele36g0726 1345 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 507 541 IPR002885 -
Lele36g0726 1345 Pfam PPR repeat family 334 382 IPR002885 -
Lele36g0726 1345 Pfam PPR repeat family 507 555 IPR002885 -
Lele36g0726 1345 Pfam PPR repeat family 402 449 IPR002885 -
Lele36g0726 1345 Pfam PPR repeat family 267 311 IPR002885 -
Lele36g0726 1345 Gene3D Tetratricopeptide repeat domain 64 192 IPR011990 GO:0005515
Lele36g0726 1345 Gene3D Tetratricopeptide repeat domain 294 363 IPR011990 GO:0005515
Lele36g0726 1345 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 230 264 IPR002885 -
Lele36g0726 1345 Gene3D Tetratricopeptide repeat domain 471 618 IPR011990 GO:0005515
Lele36g0726 1345 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 300 334 IPR002885 -
Lele36g0726 1345 Pfam PPR repeat 135 161 IPR002885 -
Lele36g0726 1345 Pfam PPR repeat 477 498 IPR002885 -
Lele36g0726 1345 Gene3D Tetratricopeptide repeat domain 193 293 IPR011990 GO:0005515
Lele36g0726 1345 Gene3D Tetratricopeptide repeat domain 387 470 IPR011990 GO:0005515
Lele36g0726 1345 Pfam Protein tyrosine and serine/threonine kinase 1190 1291 IPR001245 GO:0004672|GO:0006468
Lele36g0726 1345 Pfam Protein tyrosine and serine/threonine kinase 1113 1178 IPR001245 GO:0004672|GO:0006468
Lele36g0726 1345 ProSiteProfiles Protein kinase domain profile. 1088 1345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0726 1345 PANTHER ATPASE EXPRESSION PROTEIN 3 447 611 - -
Lele36g0726 1345 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 265 299 IPR002885 -
Lele36g0726 1345 SUPERFAMILY L domain-like 879 1075 - -
Lele36g0726 1345 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 402 436 IPR002885 -
Lele36g0726 1345 Gene3D Transferase(Phosphotransferase) domain 1 1175 1315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0726 Lele-ChrLele36 5594678 5612716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0726 1189 1345 Receptor kinase-like Gene Family AT5G49760 54.430 3.14e-49 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele36g0726 PK_Tyr_Ser-Thr 1.7e-08 CL0016