Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0721 ATGGCGTCGTCATCGCCTTCCCAAACAGAGCTTCTTCCTCTCAACCAGGATGACTCTCAAGACATGGTCATCTACCATGTCCTCTCTGAAGCCAACGCTCTTCCACCTTCTTCTCCCACTTCTACTTCTGCACCAGTCCTTGGCCTCCATCAGGCTACCACCAGGGCCGTCAAGAAGCACTACCGGGGCGTCAGACGGCGGCCGTGGGGGAAGTATGCAGCAGAGATCAGGGACTCGGCTCGCCACGGGGCTAGGGTTTGGTTGGGAACATTTGAGACCGCAGAAGAAGCTGCTTTGGCTTATGACAGAGCAGCTTTCAGAATGAGAGGTTCAAAGGCTCTGCTTAATTTCCCTCCTGACCTTGTAGCTCCTTCTTCTTCTATTCTTAGCCCAGAAAGATTGAATGACAAGGCTTCTTCCGGTTCTGATTCAAGTGCTCTAATTATTTCATATGCAAGTTCTGCTGATTCCAGCTAG 477 0.5136 MASSSPSQTELLPLNQDDSQDMVIYHVLSEANALPPSSPTSTSAPVLGLHQATTRAVKKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGSKALLNFPPDLVAPSSSILSPERLNDKASSGSDSSALIISYASSADSS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0721 158 Gene3D AP2/ERF domain 59 119 IPR036955 GO:0003700|GO:0006355
Lele36g0721 158 CDD AP2 59 120 IPR001471 GO:0003700|GO:0006355
Lele36g0721 158 PANTHER DNA-BINDING DOMAIN 43 133 IPR044808 GO:0003700|GO:0009873
Lele36g0721 158 SMART rav1_2 60 124 IPR001471 GO:0003700|GO:0006355
Lele36g0721 158 SUPERFAMILY DNA-binding domain 60 119 IPR016177 GO:0003677
Lele36g0721 158 FunFam Ethylene-responsive transcription factor 2 59 119 - -
Lele36g0721 158 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Lele36g0721 158 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Lele36g0721 158 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Lele36g0721 158 ProSiteProfiles AP2/ERF domain profile. 60 118 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0721 Lele-ChrLele36 5559691 5560167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0721 12 118 AP2-EREBP Transcription Factor Family AT4G17500 52.593 8.79e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele36g0721 AP2 1e-15 CL0081