Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0720 ATGGCAATTATTCATGGTGATCATCAAGCAAAACCCAGCTTTGGTTTCGCGGTAATTGAGGAGGCGTCGTTGTCCGACTCGAAGGATCCAAATTCGAATTACCAGATTAACCAGAAAAGTAGTGATAATCATCATAATCATCATCATCATGCAGCTGCAGATTCAGAAGCGATTCTTGAGAACATATGGGCAAGGGTTATGAGCAGTAATAATGGTAGAATAAAAAGAGAGAATGCATGGGAAGGGCCTCCAAATCTTGAAGGAAGAGACAAAGCTATGGAGATTCTACAAAGGCTTCCAAGTTTGGGAAGATGGATATCAATGGGAGCTGAGGCATGGGAAGAGATTTTAGCTGATTTTCCACAAAACCTTGTCCTTGACAATCTGGGGATTTGCAGGATCATTAATGAATCCAACTATAAGAAGGTAGAACAAAAAGAGAAAGAAGGAGGAGGAGGTGGTAGTGCAGTGAGGGCAAAGAATAATAATAAGGAAGGTGAAAGTAGAACACATTACAGGGGAGTGAGAAGAAGGCCATGGGGGAAATATGCAGCAGAAATAAGGGACTCATCAAGGAATGGGGCTAGGGTTTGGCTTGGGACATTTGAGACAGCTGAAGGAGCAGCTTTAGCTTATGATAAAGCAGCTTTGAGAATTAGAGGTCCCAAGGCTTACTTGAATTTCCCTATTGAGACTGTTGCAAATGCTTTAGGCTTTGACCTCAAGGGTACTATTACCTCTTCTTCTTCTTCAACTAATTGTGAGGAGGATTATTCTGAAAATTGCAGCAAGTCCAAGAAAAGAAGATTGAGAAATAGTGAAGAACCTGAAGCCAAAAGGATGGCGAATAATATGGGGAATGAATTGGATGTTGTTGTGTTTCAGGACTTGGGGAATGATTACTTGGAGAGTTTGTTATCTTCTTTTTGA 930 0.4108 MAIIHGDHQAKPSFGFAVIEEASLSDSKDPNSNYQINQKSSDNHHNHHHHAAADSEAILENIWARVMSSNNGRIKRENAWEGPPNLEGRDKAMEILQRLPSLGRWISMGAEAWEEILADFPQNLVLDNLGICRIINESNYKKVEQKEKEGGGGGSAVRAKNNNKEGESRTHYRGVRRRPWGKYAAEIRDSSRNGARVWLGTFETAEGAALAYDKAALRIRGPKAYLNFPIETVANALGFDLKGTITSSSSSTNCEEDYSENCSKSKKRRLRNSEEPEAKRMANNMGNELDVVVFQDLGNDYLESLLSSF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0720 309 MobiDBLite consensus disorder prediction 25 53 - -
Lele36g0720 309 FunFam Ethylene-responsive transcription factor 2 170 231 - -
Lele36g0720 309 Pfam AP2 domain 170 221 IPR001471 GO:0003700|GO:0006355
Lele36g0720 309 PRINTS Ethylene responsive element binding protein signature 195 211 IPR001471 GO:0003700|GO:0006355
Lele36g0720 309 PRINTS Ethylene responsive element binding protein signature 172 183 IPR001471 GO:0003700|GO:0006355
Lele36g0720 309 SMART rav1_2 171 235 IPR001471 GO:0003700|GO:0006355
Lele36g0720 309 MobiDBLite consensus disorder prediction 144 173 - -
Lele36g0720 309 PANTHER DNA-BINDING DOMAIN 139 305 IPR044808 GO:0003700|GO:0009873
Lele36g0720 309 MobiDBLite consensus disorder prediction 25 40 - -
Lele36g0720 309 ProSiteProfiles AP2/ERF domain profile. 171 229 IPR001471 GO:0003700|GO:0006355
Lele36g0720 309 CDD AP2 170 230 IPR001471 GO:0003700|GO:0006355
Lele36g0720 309 Gene3D AP2/ERF domain 170 231 IPR036955 GO:0003700|GO:0006355
Lele36g0720 309 SUPERFAMILY DNA-binding domain 171 231 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0720 Lele-ChrLele36 5550319 5551248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0720 58 309 AP2-EREBP Transcription Factor Family AT4G18450 32.704 1.38e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele36g0720 AP2 1e-14 CL0081