Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0689 ATGGCAAGCTCACGTTCCTGCAACAATTGTCGGAAAACTTCTCTTGTTAGGGATGACGTGTCTGGGGATTTGATATGTTCCTTGTGTGGTGTTGTTCAAGAATATGATCAGTTTGAAGCCCATGTTGGTGGTATCAATGGCCCTCAAGGAACATTCGTCCGGGTTGGAACTGCAGGTGCAGGTACTATATACAGTTACAAAGAAAGGAAATTCTTTCAAGCCCAAAGTCTGATAGAGGAATTAACTTCTAGATTAGGTATATCTTCAAAAATTAGTGATATTAAAGCGATGATTTCTACCATCACAGAGGGTGAATTTGGGCAAGGTGATTGGTTTGAAGTTTTGATTGGTGCATGTGTGTATATAGTGATGCGAAAGGATAATTGCCCGATGTCTATGGCTGAAGTGGCTTGTGCAGTTGGGTGTGATGTTTATGAATTGGGTAAGATGATTAAACGGGTTATTGATTTTATGGATTTGAAAAAATACGATTTTCCAGAGTTTGATATTGTGCATTCATTGGAAAGGGTCCTTAAGATTTCTCCTTCTTTTGCTAGAATTGACAGGAGCAAAGTAGACAGAATGCGCAAGCAGGGGATATTTTTAATTCAGTGCGCAATGAAGTGGTTTTTGAGTACTGGGCGTAAGCCACTTCCGCTGGTAGTTGCTGTTTTAGTTCTGGTAGCAGAATTGAATCAAGTTCAACTTGGGATTAGTGAGTTGGCCAAGGAAGTTCATGCCATTGTTTCCACTTGTAAATCGCGATACAAAGAGCTTTTAGAGAAACTTGTAGAAGTTGCACAAGTCCTGCCTTGGGGAAGAGATATCACCACTAAAAACATTGTTAAACATGCACCATCTGTATTGAAGTATTTGGAGACAAAGGCTATGTTGAAACCTATTGATAAAAGAGAAGACCTAGATCATTCAGAGTTTAACTTGGCAGATAAGGTCAGTGAATGTTTAAGACAAGTTGATGAACATGGACACAAGACTGATGCCATAAACCTGCCAAGTGATTCTCATTGTAGTATACCACAAAGCAATATTAACTCTAGAAGACCAAGTGCTAGGGATGCAAACAAACTGCTTTATTCACCTGAATGTTTATCCGTGTTGTATGAGAAATCTTCAGATCGGGTCAATCTTCATGATTGTCGCGAGTGGTGGAATGGAAAATCGGAATTGAGCAAAAAGCTTATACTCAAACAGTTACTTGAGAAGGATGTCGGATTTGAAACCATGCCGCTTTCTTTTACTTCCAGCTGCTTGAAATATGAGATCAGGAGAGAGAGGATTAATGCTGCTAAGGTACGTATAGATAGAATAATGCATCCATTGAATTCTGATTTGGGTGGTAATTGTTCTGAGAAAAAATTGAAGAGAAGAAGAAAGCTTGTTGATGGCATTGATTGGGAAGACTTGATTATTGAGACCTTACTTCTTCATCAAGTAAAGGAGGAGGAAATTGAGAAGGGATACTACAATACATTACTGGATTTACATGTGTTTAACTCTGGCATATGA 1527 0.3897 MASSRSCNNCRKTSLVRDDVSGDLICSLCGVVQEYDQFEAHVGGINGPQGTFVRVGTAGAGTIYSYKERKFFQAQSLIEELTSRLGISSKISDIKAMISTITEGEFGQGDWFEVLIGACVYIVMRKDNCPMSMAEVACAVGCDVYELGKMIKRVIDFMDLKKYDFPEFDIVHSLERVLKISPSFARIDRSKVDRMRKQGIFLIQCAMKWFLSTGRKPLPLVVAVLVLVAELNQVQLGISELAKEVHAIVSTCKSRYKELLEKLVEVAQVLPWGRDITTKNIVKHAPSVLKYLETKAMLKPIDKREDLDHSEFNLADKVSECLRQVDEHGHKTDAINLPSDSHCSIPQSNINSRRPSARDANKLLYSPECLSVLYEKSSDRVNLHDCREWWNGKSELSKKLILKQLLEKDVGFETMPLSFTSSCLKYEIRRERINAAKVRIDRIMHPLNSDLGGNCSEKKLKRRRKLVDGIDWEDLIIETLLLHQVKEEEIEKGYYNTLLDLHVFNSGI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0689 508 Pfam Transcription factor TFIIB repeat 69 153 IPR013150 GO:0017025
Lele36g0689 508 SUPERFAMILY Cyclin-like 197 264 IPR036915 -
Lele36g0689 508 Gene3D - 65 163 - -
Lele36g0689 508 SUPERFAMILY Cyclin-like 73 160 IPR036915 -
Lele36g0689 508 ProSiteProfiles Zinc finger TFIIB-type profile. 3 34 IPR013137 -
Lele36g0689 508 Gene3D - 2 40 - -
Lele36g0689 508 Gene3D - 170 267 - -
Lele36g0689 508 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 4 393 IPR000812 GO:0006352|GO:0070897
Lele36g0689 508 SUPERFAMILY Zinc beta-ribbon 5 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0689 Lele-ChrLele36 4935412 4936938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0689 7 259 Inorganic Solute Cotransporters AT2G01280 21.456 7.16e-06 46.6