Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0672 ATGTCAGAAGACGAACACGAGATTTATTATGACAAAGATAAGTGTGAGGAAGCTACTTCACTGTGGTCTTCTTCTCAGAAGTGTTCATCGTTCGACTTGAATGAGGAAGCTACCAGTGAAGAAGAAGAACAACAACAAGAAGGAGACGGAGAAGAAGAGGAAGAGGAAGAGGAGGAGAAGGATCAGAGAGAGCGAGAAGAAGAAGAGGAGAAGGAGAAAATGAAGGAACATAATGAAGGGACTTCATCATCAAACAGAAGCACATCGAGAGAACGAAATGAAGGAAAAAGCATAGTGAGACAATATGTGAGATCCAAGATGCCTAGGCTTCGTTGGACTCCAGATCTTCATCTCTCTTTTGTTCAGGCTCTTAAACGCCTTGGTGGTCAAGAGAGAGCAACGCCCAAGTTAGTGCTTCAGCTGATGAATGTGAGAGGACTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGGAGTAAGAAACTTGATGAGGCTGGCCAAGTGATAACTCAAACGTACAGATCATCGCAAGTTGGTCGTATTTCACAGCTAGCGTATCAAACGATGAATACAAGGCAACAATTCAAGATGGGAAACGGTGGAATTATTCTAGCTACCAATTGCAACGACCATGCTGCTGGGTTTGTTCAACATGCTCTCTCTAAGCCTTCTTTTACCCTTTCTCACTCTCATACATCAATGGCCACAGATTCAAGGCACCAACAATGGTATAGAAGGCAAAGCTGCACGACAAACAAGGAAGTGATGATGATGCCCTCAACATCAGACCGAATAGCACCCATGAGGCCCAGCCAATTTCTTGAAGAGAAAAAGTGGCCTCCATTAGAAATTATTGGCAATAATAATATTAATAATAATCAGCATTATTGGAAGTTCAAGAAAATGCATTCGACCGGTAATATTATTAACTGTATTAATGATTCACAATCTGGATTTCACCAACTTGTTGGCACCATGCATACACCTGTGGAGCCACCTGATCAATGGAGTTTTGGAAATTTCAACAATAGCAGCAACAGTTCCAAGAGTTTGAAGCTAGAATTTGAGGTCCCATTTCGGATTAAGTTAAATGAAGAGAAAGTGGAGAAAGACGAGCAATCGTTGCCTGATCTGCAACTGGGATTGAATTATCAGAATGATGACCATTGCAAAGAGACCCAAGATATTAACACTAAGCTTTCCCTTTCTTAG 1218 0.4171 MSEDEHEIYYDKDKCEEATSLWSSSQKCSSFDLNEEATSEEEEQQQEGDGEEEEEEEEEKDQREREEEEEKEKMKEHNEGTSSSNRSTSRERNEGKSIVRQYVRSKMPRLRWTPDLHLSFVQALKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVITQTYRSSQVGRISQLAYQTMNTRQQFKMGNGGIILATNCNDHAAGFVQHALSKPSFTLSHSHTSMATDSRHQQWYRRQSCTTNKEVMMMPSTSDRIAPMRPSQFLEEKKWPPLEIIGNNNINNNQHYWKFKKMHSTGNIINCINDSQSGFHQLVGTMHTPVEPPDQWSFGNFNNSSNSSKSLKLEFEVPFRIKLNEEKVEKDEQSLPDLQLGLNYQNDDHCKETQDINTKLSLS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0672 405 Gene3D - 107 164 - -
Lele36g0672 405 MobiDBLite consensus disorder prediction 1 99 - -
Lele36g0672 405 MobiDBLite consensus disorder prediction 1 18 - -
Lele36g0672 405 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 108 163 IPR006447 GO:0003677
Lele36g0672 405 MobiDBLite consensus disorder prediction 35 65 - -
Lele36g0672 405 SUPERFAMILY Homeodomain-like 106 162 IPR009057 -
Lele36g0672 405 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 85 236 - -
Lele36g0672 405 Coils Coil 34 80 - -
Lele36g0672 405 MobiDBLite consensus disorder prediction 66 80 - -
Lele36g0672 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 164 IPR017930 -
Lele36g0672 405 Pfam Myb-like DNA-binding domain 110 160 IPR001005 -
Lele36g0672 405 FunFam Myb family transcription factor 106 164 - -
Lele36g0672 405 MobiDBLite consensus disorder prediction 19 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0672 Lele-ChrLele36 4755320 4758725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0672 99 179 G2-like Transcription Factor Family AT2G42660 70.370 1.40e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele36g0672 Myb_DNA-binding 1.8e-06 CL0123