Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0651 ATGGCAATATCAGCCGAAGCTAATAAGAACATCAAGGCCAGAAAGAAATCATCATCCAGAGGCCACCATTGCTTTGTCGGAGTTCGGCAGAGGCCGTCAGGACGGTGGGTGGCCGAAATCAAAGACTCCCTTCAGAAGGTCCGGCTTTGGCTCGGAACATTCGACACAGCAGAGGATGCCGCTCGCGCCTACGACACCGCCGCACGAGCTTTGCGTGGCGCCAACGCTCGCACCAACTTCGACTTGCCAGATCCGGGAGGCGGCAGCGGGGGTGCCACCACCCAACACGGTGGCATTAGTTTCAGCTACATGCCGGAGAATCTCGAGCCGTTCTCGTTCGAGGACACGAGTGTGGGATCAGATCACCATGACCTCCTCGGAGCACTCAAGGCCAAGCTGTTTGATGACAATGGAGGAGTAGTGAGATTTCCTTCTCGATTATCTAATAATAGCCAAATCTTGACAGGTTTTGTAAACCCTAATAATAATAATCCAGGGTTTGCAAGCACGTCTTCATCAAGCACAAGCACGAGTGCTAAGAGCACTCACACCAATAATAATAACAATAGTAATATGCTAATCTCAGATCAACACGATCATGGAGGTTCTATAGCGGCTGCAAATAATAATTCTTCTACAGTACCCCTAATGACTACTTCATGGTCCAATAACAACAACGAGATAGGTAATTATGAATTGCCTAATTGGTATACAGGTCCTACACAGATATTGAACCAGGTGGTTCCTGAAAATAATAGTAGCTTGTTTGCATCTTCAAGTAATTCTCCATGGCCAACAACACTATCTGGGGTTCACGTTATTGAGCCTACGATGAATATGATGTATTCAGATGTGGTCAACCTTGTTAACATCGAGCAGAGAGAACATGATTCAGATAGATCAGTCTTAGGATACTCCGATTTTAATAATAATAATCAAAATATGATGTTTTCTGAGAATCATATTGGGCCTTCTTCAAGTAGCAGAACTATTAATGCTCAAATTGGAGGACTACACGAAGGGTTTTGGACAAATACAGATCAGCAGCAGCAGCAGCAAGTTCTGGTGCAGATTGACAATAATGGTAGTTGGTTTAGTTCCAATAATAATAATAATGATACGTGGGATCCTTTGCTTTTTGTATCGTCTGAATTAGGGTGA 1161 0.4444 MAISAEANKNIKARKKSSSRGHHCFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDTAARALRGANARTNFDLPDPGGGSGGATTQHGGISFSYMPENLEPFSFEDTSVGSDHHDLLGALKAKLFDDNGGVVRFPSRLSNNSQILTGFVNPNNNNPGFASTSSSSTSTSAKSTHTNNNNNSNMLISDQHDHGGSIAAANNNSSTVPLMTTSWSNNNNEIGNYELPNWYTGPTQILNQVVPENNSSLFASSSNSPWPTTLSGVHVIEPTMNMMYSDVVNLVNIEQREHDSDRSVLGYSDFNNNNQNMMFSENHIGPSSSSRTINAQIGGLHEGFWTNTDQQQQQQVLVQIDNNGSWFSSNNNNNDTWDPLLFVSSELG 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0651 386 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Lele36g0651 386 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Lele36g0651 386 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Lele36g0651 386 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Lele36g0651 386 SUPERFAMILY DNA-binding domain 24 81 IPR016177 GO:0003677
Lele36g0651 386 MobiDBLite consensus disorder prediction 154 209 - -
Lele36g0651 386 CDD AP2 25 81 IPR001471 GO:0003700|GO:0006355
Lele36g0651 386 Gene3D AP2/ERF domain 24 82 IPR036955 GO:0003700|GO:0006355
Lele36g0651 386 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 22 249 - -
Lele36g0651 386 FunFam ethylene-responsive transcription factor RAP2-11 23 82 - -
Lele36g0651 386 Pfam AP2 domain 25 73 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0651 Lele-ChrLele36 4467850 4469010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0651 12 80 AP2-EREBP Transcription Factor Family AT5G19790 68.571 6.65e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele36g0651 AP2 4e-13 CL0081