Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0611 ATGCCTCGTAAGGTGAATTATGGACTTGATTTCGATGGTGATTTCGATGACTATGAAGAGTATGACTATGATGTTGAAATAGAAGAATATGGAGAAGAACCTGGACCTGTTAAAAAGAAAGAGACTAAAAGTTTTTGGAGATGCTCTATTTGCACTTACGACAACGCAGAGGGGATGAATGTATGTGATATTTGTGGTGTCGTGCGTCATCCTTTGGTTAACACAGGAACTTCTGACAATAACAAAACAGGTCAAGAAGTAACCCTTCCAGATCTTGGCTTTAGTCTAATTAAAGGCATATGCAAAAATTCTGGAGCATCCAAATTGGCCAAGTCTCTTTTTGTATCACTGCCACAACCGATGCCCAAAGAGGGTGTGTTATTTCTTAAGAAGGGTGATGGTTTTCTGACAGACGATGGCAATAACTACAAGCTTGGGAATGCCCAAGGCGAATTTTATGAAACTCACAAGTCTTTTATTACTCAAGGCCATCACCTTCTTAACATAGCTCCTTTCAAGTTTGATGTTCCATCCCCAGATAATGTGGTTTCTACTGGATTGCGGTCTTCCAAAATGGGATTGAAAGGGACAGTTGCAGACACTAGAAGTTTAAATAATGAACTGAAAGTACAGTCAAATAGTGAAAGTTCAGATGGTTCATCTTTAGTTCAGAAGGGCAGGCAGGATATTTTTGCTGAGAGCAAGCATTCTAAAGATGTAGCATTTAATCAGGAAATAAGTGATAAAACTTCAAGTAGCTTACCAGCATCTTCTGCGAAGGGTGAAGCTAAAATGAGTAAAATCAAGTCTTCCAATAATGGCAAATTTGATATTCAATCCAATGAAGAATTGTCGAATAGTTTGTCTGCACTGCTGAAAGTCAGAGACGGTGGTGTTGAAATTCATTGCTCTTCTATCAAAGATGTTGAATCTCAAAGTAGTTCTGAGAACATGGCTTTTGATGTAAGAACAGGAAAATCAGATGATACTATTTCCAAAGGACCACATCCGCAAATGCCTTATAAACCAGAAAAATGGATGCTCCCTCAACAAGCTGAAGATACCTTGACTCAGCTAAATCTTGCAGTTGTTGGTCATGTTGATTCTGGGAAGTCAACACTCTCAGGTAGACTACTACACCTGTCAGGACGAATTACACAGAAAGAAATGCACAAATATGAAAAGGAAGCCAAATTACAGTTGGTGCATATGAAGCAGATGGATGCTGTGGGATACTCTAAAGATCGGTTTGATTTAATTAGACAGCAATTGGGAGTGTTTCTACGGACATGTGGTTTTAAAGATTCTTCTGTGTCATGGATTCCCATGAGTGTCGTAGAAAATCAAAATTTGGTGGCATCTCCTTCTGATGCTCGTTTCAAATCCTGGTACAAAGGACCGTATTTGTTAGACGCAATTGATTCACTACAACCTCCAACTAGAGAATTCTCAAAGCCTCTACTAATGCCAATATGTGACGTTATCAAGTCACCAACACTTGGACAAATCTCTGCTTGTGGTAAATTAGAAGCTGGAGCTCTTCGGATTGGATCGAAGGTCTTAGTTATGCCTTCAGCTGTTTTGGGGACAGTTCGCACATTGGAGCGTGATTCTAATGGCTGCACTATTGCAAGAGCTGGAGATAATGTAGCTGTTACGTTGAATGGTGTAGATGCAAGTCATGTAATGCCAGGAGGAGTATTATGCCATCCTGATTTTCCTGTTAAAGTTGCAAGTCATTTGGAGTTGAAGGTGCTTGTGTTAGAAGGTGCAAATGCCATACTGGTTGGATCACAGTTAGAGTTTCATATACATCATGCCAAGGAGCCTGCTAAAGTTTCAAAAATATTGTCAGTACTTGATCCAAAGACCGGGAAGGTGATAAAAAGGTCCCCTCGCTGTCTCATTGCAAAGCAGAGTGCAGTAGTGGAGGTAGTGTTGCAAGAGCCAGTGTGTGTGGTTGAATCATCTAGTTGTAAAGCTCTTGGAAGGGTGTCTCTAAGAACATTAGGAAGAACAATCGCTGTTGGACTTGTGACCCGAATAATTGGAGAGCAAGAGTGA 2064 0.4036 MPRKVNYGLDFDGDFDDYEEYDYDVEIEEYGEEPGPVKKKETKSFWRCSICTYDNAEGMNVCDICGVVRHPLVNTGTSDNNKTGQEVTLPDLGFSLIKGICKNSGASKLAKSLFVSLPQPMPKEGVLFLKKGDGFLTDDGNNYKLGNAQGEFYETHKSFITQGHHLLNIAPFKFDVPSPDNVVSTGLRSSKMGLKGTVADTRSLNNELKVQSNSESSDGSSLVQKGRQDIFAESKHSKDVAFNQEISDKTSSSLPASSAKGEAKMSKIKSSNNGKFDIQSNEELSNSLSALLKVRDGGVEIHCSSIKDVESQSSSENMAFDVRTGKSDDTISKGPHPQMPYKPEKWMLPQQAEDTLTQLNLAVVGHVDSGKSTLSGRLLHLSGRITQKEMHKYEKEAKLQLVHMKQMDAVGYSKDRFDLIRQQLGVFLRTCGFKDSSVSWIPMSVVENQNLVASPSDARFKSWYKGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSPTLGQISACGKLEAGALRIGSKVLVMPSAVLGTVRTLERDSNGCTIARAGDNVAVTLNGVDASHVMPGGVLCHPDFPVKVASHLELKVLVLEGANAILVGSQLEFHIHHAKEPAKVSKILSVLDPKTGKVIKRSPRCLIAKQSAVVEVVLQEPVCVVESSSCKALGRVSLRTLGRTIAVGLVTRIIGEQE 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0611 687 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 580 683 IPR009001 -
Lele36g0611 687 FunFam Translation elongation factor EF-1 483 573 - -
Lele36g0611 687 Gene3D Translation factors 484 573 - -
Lele36g0611 687 Pfam Elongation factor Tu C-terminal domain 575 682 IPR004160 -
Lele36g0611 687 Pfam Elongation factor Tu GTP binding domain 359 398 IPR000795 GO:0003924|GO:0005525
Lele36g0611 687 MobiDBLite consensus disorder prediction 244 268 - -
Lele36g0611 687 PANTHER TRANSLATION FACTOR 355 398 - -
Lele36g0611 687 FunFam elongation factor 1-alpha isoform X4 577 686 - -
Lele36g0611 687 ProSitePatterns Zinc finger RanBP2-type signature. 46 65 IPR001876 -
Lele36g0611 687 Gene3D Translation factors 574 682 - -
Lele36g0611 687 SUPERFAMILY Translation proteins 484 607 IPR009000 -
Lele36g0611 687 MobiDBLite consensus disorder prediction 242 268 - -
Lele36g0611 687 CDD HBS1-like_II 486 570 - -
Lele36g0611 687 Gene3D - 347 403 IPR027417 -
Lele36g0611 687 Gene3D - 404 480 IPR027417 -
Lele36g0611 687 CDD HBS1_C_III 574 682 - -
Lele36g0611 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 501 IPR027417 -
Lele36g0611 687 SUPERFAMILY Ran binding protein zinc finger-like 42 69 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0611 Lele-ChrLele36 4065063 4071714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0611 41 81 Eukaryotic Initiation Factors Gene Family AT5G10630 56.098 5.56e-11 63.9