Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0581 ATGGAAATGGATCAATCAGAGTTGCAAGCTTATCTTCAATATATTGAAGAGAAACTGCTAAATGATGATGATGATGTAATGCTAGAGAACACAGAAGTTGAGTTGACTACTCCAGTCCCCTCTACATACTCAAACACTGAGCTCTCCAACTGCTATTCAGAGTCTCATAACACATTGAACTTAGATCCACCAAATAATGTCTCATGCACTTTATCTGTGGATCAACAAATTCAAATTCCTCATTCATCAACCCCTCAAATCCATACTTCTCCCTCGCCAAACGCATCAAATCTTTCAAATGTTCCAGTGCATCGTCGTAGTGACGTGGTGCCAGAAACACAAATTCAAGTGGCCAGTCATCCTCAAGAATACTTTTATAATCAAACTAATGATGACCATATGCATCCCCAAGTTCCTTATAATTTTCAACTGCATCAGTCGCCTCCGATAGATGAATTCAGCCCTCAATTTCCTTCAGCTGTTCCAATGCAAATGCAACTTCCTATGAATCACACTAGCCAACAAAATAGCACACAATTGGCCCCTAGCATGCCGACTAGATCGGTCCACCACCAACTATATCATCACCTATCACAGGAGACTACAATGCTCCCTAATTTTCCATCTGCCCCTTTTTATTATAATTCAACTCCTCAAAACCATATTGTTCATTCAGTTCCTCCAATACATCAGTGGAACCTACAAAATCTATCTAATGGTGTTCAATATAACCCACAACCATCTCATGAGCTACAACCACTGACTTCACCACCTGAGTTTTCATCAGACCCTTGGCTCTCTAATAGGCAACACTTGTTGAATCAGCCTTCCTTTATTAACTCAGAAGCACCAATAAATATTGATCAAGCCAATAATAACAAGGGAAAGTGTTGGAGTGAAGACGAACACAGGCGATTTCTAATTGGATTGCTGCGGTATGAGAAGGGTGATTGGAAGAGGATTTCCGAGATGGTGATGACAAGGACACCAACTCAGGTTGCTAGCCATGCTCAGAAATTCTATGAGCGCAGAGATAGGAATGCAAACGAAAGTAGAAAAAAAATAAGAAGAAGCATCCTCGATATCACCGATCCCTTTGCTTTTCACTGA 1110 0.4063 MEMDQSELQAYLQYIEEKLLNDDDDVMLENTEVELTTPVPSTYSNTELSNCYSESHNTLNLDPPNNVSCTLSVDQQIQIPHSSTPQIHTSPSPNASNLSNVPVHRRSDVVPETQIQVASHPQEYFYNQTNDDHMHPQVPYNFQLHQSPPIDEFSPQFPSAVPMQMQLPMNHTSQQNSTQLAPSMPTRSVHHQLYHHLSQETTMLPNFPSAPFYYNSTPQNHIVHSVPPIHQWNLQNLSNGVQYNPQPSHELQPLTSPPEFSSDPWLSNRQHLLNQPSFINSEAPINIDQANNNKGKCWSEDEHRRFLIGLLRYEKGDWKRISEMVMTRTPTQVASHAQKFYERRDRNANESRKKIRRSILDITDPFAFH 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0581 369 CDD SANT 298 340 IPR001005 -
Lele36g0581 369 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 293 343 IPR006447 GO:0003677
Lele36g0581 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 294 345 IPR017930 -
Lele36g0581 369 SMART sant 294 343 IPR001005 -
Lele36g0581 369 PANTHER TRANSCRIPTION FACTOR KUA1 291 363 - -
Lele36g0581 369 MobiDBLite consensus disorder prediction 82 101 - -
Lele36g0581 369 ProSiteProfiles SANT domain profile. 298 345 IPR017884 -
Lele36g0581 369 Gene3D - 296 346 - -
Lele36g0581 369 SUPERFAMILY Homeodomain-like 293 344 IPR009057 -
Lele36g0581 369 Pfam Myb-like DNA-binding domain 297 339 IPR001005 -
Lele36g0581 369 MobiDBLite consensus disorder prediction 244 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0581 Lele-ChrLele36 3798490 3799706 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele36g0581 Myb_DNA-binding 8.7e-09 CL0123