Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0580 ATGCCTTCAATACATCAATTTAACCCACAGAGTCTTTCAAATGTCCCAATGAATCAGCCACAACCATTAAATGCTCAATTTAACTCCGAAGTTCCTTATAATTTCTCAGTGCATCAGTCACCCCCGATGGATGAATTCTGCCCTCAAGTTCCTTTAGCTATTCCAATGCAAATGCAACTTCCTATGAATCAGTCTAGCCAACAAAATATCACACAATTGGCCCCCAGCATGCAGACTAGATTGGTCCACCACCAACCATATCATCACATGTCACTAGAGACTACAATGGTGCTTAATTTTCCATCAGGCCCTTTTCATTCTAATTCAACTCCTCAAAACCACATTGTTCATTCAGTTCCTCCAATACATCAATGGAACCTACAAAATCTATCAATGGTGCATGAGCTACAACCGCTGACTTCACCACTTGAGTTTTCATCAGACCCTTGGCTCTCTAATAGGCAACACTTGTTGAATCAGCCCTCCTTTATTAACTCAGAAGCACCAATAAATATTGATCAAGCCAATAATAACAAGGGAAAGTGTTGGAGTGAAGACGAACACAGGCGATTTCTAATTGGATTGATACAGTACGAGAAGGGTGATTGGAAGAGCATTTCTAAGATTGTGAAGACAAGGACACCAACTCAGGTTGCTAGCCATGCTCAGAAATTCTATGAGCGCCGAGATAGGAATGCAAATGAAAGAAGAAAAAGAATAGGAAGCGTCCTCGATATCACCGATCCCTATGCTTTTCACTGA 762 0.4108 MPSIHQFNPQSLSNVPMNQPQPLNAQFNSEVPYNFSVHQSPPMDEFCPQVPLAIPMQMQLPMNQSSQQNITQLAPSMQTRLVHHQPYHHMSLETTMVLNFPSGPFHSNSTPQNHIVHSVPPIHQWNLQNLSMVHELQPLTSPLEFSSDPWLSNRQHLLNQPSFINSEAPINIDQANNNKGKCWSEDEHRRFLIGLIQYEKGDWKSISKIVKTRTPTQVASHAQKFYERRDRNANERRKRIGSVLDITDPYAFH 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0580 253 ProSiteProfiles SANT domain profile. 183 230 IPR017884 -
Lele36g0580 253 Gene3D - 181 231 - -
Lele36g0580 253 SMART sant 179 228 IPR001005 -
Lele36g0580 253 PANTHER TRANSCRIPTION FACTOR KUA1 175 248 - -
Lele36g0580 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 179 230 IPR017930 -
Lele36g0580 253 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 178 228 IPR006447 GO:0003677
Lele36g0580 253 CDD SANT 183 225 IPR001005 -
Lele36g0580 253 Pfam Myb-like DNA-binding domain 182 224 IPR001005 -
Lele36g0580 253 MobiDBLite consensus disorder prediction 1 26 - -
Lele36g0580 253 SUPERFAMILY Homeodomain-like 178 229 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0580 Lele-ChrLele36 3794085 3794953 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele36g0580 Myb_DNA-binding 5.4e-09 CL0123