Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0579 ATGGAAATGGATCAATCAGAGTTGCAAGCTTATCTTCGATATATTGAAGAGAAACTGCTAAATGACGACGATGACGTAATGCTAGAAAATGCAGAAGTTCAGCTGGCTACTCCAGTCCCCTCCACATGCACAAATACTTTGCCCTCCAACTGTAATTCTGAGTATCATAACTCATTGAACTTAGATCCACCAAATAATATCTCATGCGCTTTACCTGCGGATCAACAAAGTCAAATTCCTCATTCATCGACTCCTCAAAATCATACTTCTCCTTTGCCAAACCCATCAAATCTTTTAAATGTTCCAGTGCATCGTCATAGTGACGTGGTGACAGAAACACAACTTCAAGCAGCCAGTCATCCTCAAGAATACTTTTATAATCAAAATAATGGTGACCATATGCATCAGAACCGGATTCCTTATTCAACTCCTCAGCAATATACTATTACTTCAGGATCAAGTCTTCCGATGCCTTCAATACATCAATTTAACCCACAGAGTCTTTCAAATATTCCAATGAATCAGCCACAACCATTGAATGATCAATTTACATCCGAAGTTCCTTATAATTTCCCAGTATATCAGTCACCTCCGACGGATGAATTCAGGCCTCAAGTTCCTTCAGCTGTTCCAATGCAAATGCAACTTCCTATGAATCACTCTAGCCAACAAAATATCACACAATTGGCCCCTAGCATGCCGACTAGATTGGTCCACCACCAACCATATCATCACCTGTCACAGGAGACTACAATGCTCCCTAATTTTCCATCTGCCCCTTTTCATTATAATTCAACTCCTCAAAACCATATTGTTCATTCAGTTCCTCCAATACATCAGTGGAACCTACAAAATCTATCTAATGGTGTTCAATATAACCCACAACTATCTCATGAGCTACAACCACTGACTTCACCACCTGAGTTTTCATCAGACCCTTGGCTCTCTAATAGGCAACACTTGTTGAATCAGCCCTCCTTTATTAACTCAGAAGCACCAATAAATATTGATCAAGCCAATAATAACAAGGGAAAGTGTTGGAGTGAAGACGAACACAGGCGATTTCTAATTGGATTGCTGCATTACGAGAAGGGTGATTGGAAGAGCATTTCCAAGATTGTGATGACAAGGACACCAACTCAGGTTGCTAGCCATGCTCAGAAATTCTATGAGCGTCGAGATGGGAATGTAAATCAAAGAAGGAAAAGAATAAGAAGCGTCCTCGATATCACCGATCCCTATGCTTTTCACTGA 1254 0.4043 MEMDQSELQAYLRYIEEKLLNDDDDVMLENAEVQLATPVPSTCTNTLPSNCNSEYHNSLNLDPPNNISCALPADQQSQIPHSSTPQNHTSPLPNPSNLLNVPVHRHSDVVTETQLQAASHPQEYFYNQNNGDHMHQNRIPYSTPQQYTITSGSSLPMPSIHQFNPQSLSNIPMNQPQPLNDQFTSEVPYNFPVYQSPPTDEFRPQVPSAVPMQMQLPMNHSSQQNITQLAPSMPTRLVHHQPYHHLSQETTMLPNFPSAPFHYNSTPQNHIVHSVPPIHQWNLQNLSNGVQYNPQLSHELQPLTSPPEFSSDPWLSNRQHLLNQPSFINSEAPINIDQANNNKGKCWSEDEHRRFLIGLLHYEKGDWKSISKIVMTRTPTQVASHAQKFYERRDGNVNQRRKRIRSVLDITDPYAFH 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0579 417 Gene3D - 345 394 - -
Lele36g0579 417 SUPERFAMILY Homeodomain-like 342 392 IPR009057 -
Lele36g0579 417 MobiDBLite consensus disorder prediction 75 97 - -
Lele36g0579 417 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 343 394 IPR017930 -
Lele36g0579 417 SMART sant 343 392 IPR001005 -
Lele36g0579 417 CDD SANT 347 389 IPR001005 -
Lele36g0579 417 Pfam Myb-like DNA-binding domain 346 388 IPR001005 -
Lele36g0579 417 PANTHER TRANSCRIPTION FACTOR KUA1 340 412 - -
Lele36g0579 417 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 342 392 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0579 Lele-ChrLele36 3786561 3787921 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele36g0579 Myb_DNA-binding 1.4e-07 CL0123