Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0563 ATGTCTGATGAGCATAAGGAAGTATACGAGCAAGGCCGATCCACCATGTACTCGTCATCGTCTTATGATTCACAAGCTTTTGATCCTTCTTACATGAGTTTAACTGAGTATCTGCAAATAGGAGCCATGGACTACAATTCGCTGGCAACTTCTTTTGGTCTCGCTGACGAATTGATTTCACCAGCTGATCACCAACAAGGCAGCACTGATCAAAAGCAATTATCAGAAGATGCAGATTGCGGCGGGGCCGGAGCCGGCGGTGAAACTCCACTACTCAACCAGAACTCATCTCTCTCTTCCTCTTCTTCTGAACCTGGCGCTGAAGAAGAAGATTCAGGCAAGAACACTGTCGACAATCACAACCAAGCGAAACGAGGAGAGGAAGCAGAAAGATCTAAGAAAGGGAAGAAAGGAAAGAAGAAAGGAGATAAGAAGAAAGAGAAGGAGCCAAGGTTTGCTTTCATGACAAAGAGTGAGGTTGATCAGCTTGAAGATGGTTACCGTTGGAGAAAATATGGCCAGAAAGCTGTCAAAAATAGCCCTTACCCAAGGTGCACGACACAGAAATGCACAGTGAAGAAACGAGTGGAGAGGTCGTTTGAGGATCCAACCACTGTGATAACAACGTACGAAGGTCAGCACAATCATCCTGTTCCCACTTCTCTCAAAGGAAATTATAATCCTGCGGCCATGTTCACACCTTCTACTTCGCCTTCTTCGTCCTCTTCCATTCTCTCTTCTCTCATGATGCCATCACCTCAAGACTTGCTTCTCCTTCATGGAGCCTCTAATATGAATAACGCTTCTCTTTATTATTCCCATCCCAACTATGCCAATCCCAATTCTGTTCAGTATCGTCTTCATCATCAGGTTCCACTTCCTGATCAGCATGACAATGGGCTCCTCCAAGACTTAATCGCTCCTATGTTCTTCAAACAAGAACCTCGAGAATGA 954 0.4507 MSDEHKEVYEQGRSTMYSSSSYDSQAFDPSYMSLTEYLQIGAMDYNSLATSFGLADELISPADHQQGSTDQKQLSEDADCGGAGAGGETPLLNQNSSLSSSSSEPGAEEEDSGKNTVDNHNQAKRGEEAERSKKGKKGKKKGDKKKEKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRCTTQKCTVKKRVERSFEDPTTVITTYEGQHNHPVPTSLKGNYNPAAMFTPSTSPSSSSSILSSLMMPSPQDLLLLHGASNMNNASLYYSHPNYANPNSVQYRLHHQVPLPDQHDNGLLQDLIAPMFFKQEPRE 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0563 317 ProSiteProfiles WRKY domain profile. 158 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele36g0563 317 Pfam WRKY DNA -binding domain 164 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele36g0563 317 SUPERFAMILY WRKY DNA-binding domain 155 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele36g0563 317 MobiDBLite consensus disorder prediction 60 154 - -
Lele36g0563 317 Gene3D WRKY domain 147 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele36g0563 317 SMART WRKY_cls 163 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele36g0563 317 MobiDBLite consensus disorder prediction 107 134 - -
Lele36g0563 317 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 242 IPR044810 GO:0003700
Lele36g0563 317 MobiDBLite consensus disorder prediction 89 106 - -
Lele36g0563 317 MobiDBLite consensus disorder prediction 1 25 - -
Lele36g0563 317 FunFam WRKY transcription factor 57 149 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0563 Lele-ChrLele36 3678595 3680318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0563 26 315 WRKY Transcription Factor Family AT4G18170 42.810 2.47e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele36g0563 WRKY 9.8e-19 CL0274