Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0548 ATGGATGTTACCATTGCTCTAGTGCTCATAGAAGCTGTATTGATTTTGCTGGCTATAGCAATTTCTAAAGCTATCAGATTAATCTCTCCAGTTGATGATAGTTGTAAAGATGTTGTTGATTCGATTCCCACGGTTTCTTCTCCTTCTCATATCATTGTTGATCCTCCTGCAACCAAGTATGACGTCTTTCTTAGCTTTAGAGGGGAAGACACTCGTGACAACTTCTCAAGTTATCTCTATGACGCACTTTGCGATGCAAACATTCAAACTTTTATGGACCACAAGCTTCACAAAGGAGAGCACATCTCACCGCTTCTTCTGACAACAATAGAGGAATCAGAGATATCTTTGATTATTTTCTCCAAAGATTATGCTTCTTCAACTTGGTGTATGGATGAGCTCCTTCATATCATGAAATGTAAGGATAAATACCAAAGGCTTGTCATCCCTATTTTCTACGATGTGGATCCATCAAATGTTCGAAAACAAAATGAACGTTTTGGAGATGGATTTGCTAAGCTTAAACAGAGATTTAAGCACAACCACGAAAAAGTGCATAAGTGGACAGATGCTTTGATCCAATCAACAAATCTTTCTGGGTGGGATTCAAGGAATATCAGGCCTGAATCCAAACTTATTAAAAAGATTGTCCAAGATATTTTGAGCAAATTGAATAGCAAGTCATCTTTTCATGTTGAAGGATTAGTTGGGATTGATCATCAGATTCAGAAAATTGAAGAGCTACTGAGTGAAGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATAGGTAAGACCACTCTTGCTAGAGCTGTATTTGACAAGTTGAAAGCACAGTTTGAAGCTTTCTCCTTTGTTGAAAATGTAAGAGAACAAATAGCAAGAATCGGATTGGATGAGTTACAGGGGAAATGCCTTCAAGAATTATTAAAAGATGATGATATCCACACTTACAATTTAAAATCTACTTTTGTGAAAAGTAGGCTTCACCGTAAAAAAATTCTTCTGATACTTGACGATGTGAACAATTCAATGGCAATTGAAGATTTAATCCAAGCATGTGATTGGTTTGGGGAAGGAAGTAGAATTATAATCACATCAAGAGACAACCAAGTGCTTAAGAATACTTCTGCCTCTACAACATATCATGTTCTACAATTGGATTGCCATCATGCCCTTCATCTCTTTAGTTTGAAAGCCTTTAAGCAAAATGAGCCATCAGAAAGCTATTTGGAGTTATCAAAGTGGGTAGTGGATTATTGTGAAGGAAATCCATTAGCCCTAAAAGTGTTGGGTTGCTTTCTTCATGGTAGAGGAAGAGAAGAATGGGAGAGTGCTATAGAAAAACTAAATCAAACTCTTCACAGGGACATTTTTAATGTTTTGAAACTGAGTTTTAATGGACTTGATGACAGGCAGAAGAATATATTTCTTGACCTAGCATTTTTTTTGATCGAAGCATGGAGGATTTCTCTGGATCATACAAGACGCTTATATGGCTCTTCTGCACATATTGAGATATGTGTACTTAAAGAGAGATCCCTCATTTCAGTACATAAAGATGGTGATATTGAGATGCATGCTCTTCTAATGGAGATGGGGCTTGAAATTTCTAGGCAACAATTAATATCTAACCCTGAAAAACCCATTCGACTGTGGAGGCACGAGGATATTTATAATTTTTTCAATAATGAAGAGGGGGCTGAGGCAATTCAATGCTTATCATTAGACATGAGCAAGATAAAAAGGATTACATTGACAAGTAGTAATTTCCAGAACATGTGTAATTTAAAATTCCTGAAATTGTACAAGTCAGATAGGAAAAAGCCATCAAAAGTGAATATTTTTGGAGATCATCTGGATTCTCTTCCTGATGAATTGAAGTTCCTGTGCTGGGTTGATTGTCCTCTTCAATCTGTGCCATTAAGCTTTTGCGCAGAGAATCTTGTTCATCTTATAATGCCAAACAGTCATCTCCAACAACTTTGGAGTGGAAATCCACAATTTCCAAATTTAAAAAATATTGATGTAAGTTGCTCGAAATATCTGACGGCACTTCCTGATCTATCTGGGGCCCCAAACCTTGAAAGCGTAGGAGTAGATGGTTGTGTAAATTTGGATCAAATCCATTCTTCAACTGTCCTGGGCAAACTTACCAACTTGACTCTTGAGTCTTGTGAAAGGTCACGGCAGATAAACTTTGGTGGCTCTTTTAATGGGACAAGAAATTCTGGGTTAGTCACTGTCAACAATTTTTTTGATCTCAGCGACTTCTCACTCACTAAAGTGACAATGAAGCTCTTGGTATCTGATGATGGCAAGATTATCACTGGTTTTCAATTTAAGCTCGTTTTAATGCCGTTCGAAGAGATATTAGAGTGCAAGGAGTATGTTGAGAGTGTGAAGTTAATATCATGGACACATAGTTTGGCGTTTTTACTTCCCTTTGTTAGGGATGTTCATTGGTCAGAGAGTCCAATTGAGTTTGGGAATTTCAAGAACCATTTTGAGTGTGATCATTACTATGATTCCTACTTCTTTGGTGAGAGGATCCAAATAAAAATGAAAAGAGTGGAGGGAGTGAAAAAGAGAGCACAAAGCGGCGTCGTGTGCATTTGGCCAAGAGATGAAGAAGAAGATGATGATGGTGGTGATGAGTTAATGGGAGAAGTGGAATGTTGCAGCAAGAATGATAAGAATACATTAACAAGAGTTCCAAAGGACATCCCTCGCTGGTCATTGTTGACACAAGTGTCATTGAAGAAGAGTGATATCATTGGCAATGCAGGTTGGAGTATTCCTCAAGTTTCGATTTTGAGGTCATTTGCAGGATCCGAGTATTGTTCTGAGGGGCTTCAAACTCTGAAGGATATAAAACTGTGTTTGGATATAGCAGCGAGAGATTGGTGTGGCCGTGATTTTTGTGTCTCCTATTGTCATCCCCCTGAATGGCTTAGAGCAATGTCTGGAGGCGCATTTTCTCTAGCACTCTTTGTTTTTGGTACTGATATTGTCTTTTGA 3021 0.3813 MDVTIALVLIEAVLILLAIAISKAIRLISPVDDSCKDVVDSIPTVSSPSHIIVDPPATKYDVFLSFRGEDTRDNFSSYLYDALCDANIQTFMDHKLHKGEHISPLLLTTIEESEISLIIFSKDYASSTWCMDELLHIMKCKDKYQRLVIPIFYDVDPSNVRKQNERFGDGFAKLKQRFKHNHEKVHKWTDALIQSTNLSGWDSRNIRPESKLIKKIVQDILSKLNSKSSFHVEGLVGIDHQIQKIEELLSEARIVGIWGMGGIGKTTLARAVFDKLKAQFEAFSFVENVREQIARIGLDELQGKCLQELLKDDDIHTYNLKSTFVKSRLHRKKILLILDDVNNSMAIEDLIQACDWFGEGSRIIITSRDNQVLKNTSASTTYHVLQLDCHHALHLFSLKAFKQNEPSESYLELSKWVVDYCEGNPLALKVLGCFLHGRGREEWESAIEKLNQTLHRDIFNVLKLSFNGLDDRQKNIFLDLAFFLIEAWRISLDHTRRLYGSSAHIEICVLKERSLISVHKDGDIEMHALLMEMGLEISRQQLISNPEKPIRLWRHEDIYNFFNNEEGAEAIQCLSLDMSKIKRITLTSSNFQNMCNLKFLKLYKSDRKKPSKVNIFGDHLDSLPDELKFLCWVDCPLQSVPLSFCAENLVHLIMPNSHLQQLWSGNPQFPNLKNIDVSCSKYLTALPDLSGAPNLESVGVDGCVNLDQIHSSTVLGKLTNLTLESCERSRQINFGGSFNGTRNSGLVTVNNFFDLSDFSLTKVTMKLLVSDDGKIITGFQFKLVLMPFEEILECKEYVESVKLISWTHSLAFLLPFVRDVHWSESPIEFGNFKNHFECDHYYDSYFFGERIQIKMKRVEGVKKRAQSGVVCIWPRDEEEDDDGGDELMGEVECCSKNDKNTLTRVPKDIPRWSLLTQVSLKKSDIIGNAGWSIPQVSILRSFAGSEYCSEGLQTLKDIKLCLDIAARDWCGRDFCVSYCHPPEWLRAMSGGAFSLALFVFGTDIVF 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0548 1006 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 755 IPR044974 GO:0006952
Lele36g0548 1006 ProSiteProfiles TIR domain profile. 58 224 IPR000157 GO:0007165
Lele36g0548 1006 SUPERFAMILY Toll/Interleukin receptor TIR domain 56 201 IPR035897 -
Lele36g0548 1006 Gene3D - 386 470 IPR042197 -
Lele36g0548 1006 SUPERFAMILY "Winged helix" DNA-binding domain 457 560 IPR036390 -
Lele36g0548 1006 Pfam NB-ARC domain 242 455 IPR002182 GO:0043531
Lele36g0548 1006 Pfam TIR domain 59 229 IPR000157 GO:0007165
Lele36g0548 1006 Gene3D - 57 227 IPR035897 -
Lele36g0548 1006 SMART till_3 59 198 IPR000157 GO:0007165
Lele36g0548 1006 Pfam Leucine Rich Repeat 648 666 IPR011713 -
Lele36g0548 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 480 IPR027417 -
Lele36g0548 1006 CDD AAA 236 370 - -
Lele36g0548 1006 Gene3D Ribonuclease Inhibitor 556 740 IPR032675 -
Lele36g0548 1006 SUPERFAMILY L domain-like 570 733 - -
Lele36g0548 1006 Gene3D - 228 382 IPR027417 -
Lele36g0548 1006 FunFam Disease resistance protein (TIR-NBS-LRR class) 56 226 - -
Lele36g0548 1006 PRINTS Disease resistance protein signature 328 342 - -
Lele36g0548 1006 PRINTS Disease resistance protein signature 421 435 - -
Lele36g0548 1006 PRINTS Disease resistance protein signature 667 683 - -
Lele36g0548 1006 PRINTS Disease resistance protein signature 254 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0548 Lele-ChrLele36 3556905 3560472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0548 60 732 WRKY Transcription Factor Family AT4G12020 31.511 1.75e-80 286