Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0537 ATGGTTAGGGATCTTGTTCAGATCTGTCGATATATTATTTCTACTTTGATTTGTCATGTGTATATGGAACTGTCTACCGCGTTGGGTGCTCGACTTGGGGAAAATTCTAAGGCTTTGTCTAGAACAGGAACTTTAAGTGATTCTAAGATAAAGGTTACAGTGGAAGCGGTTATCTCTTGTTTAGATCTTTTTCCCCCCGAGGGAATTAAAATGATAGGAATTTTTGGATGTGGCGGAATAGGTAAATCAACAATTGCAAGAGCTGTATATGATTCCATTGCTGATCATTTTGAAGGCTCGTTCTTTCTTTCCAATGCAGCAATGCATACAATGAAACTTGGTCTTAGGAGGAAGAAGATTCTTTTGATTCTTGATGATGTTGACGAATTATACCAATTAGACGCACTTGCTGGAAGGTTTGATTTGGGTCATGGAAGCAGATTTGGAATTGTTCATGTTGGCCGCAACAGGAGAACTGGAGGATTATGTGCAATAAAGGAAATACTTCACATTGACGATCCTCTTAGTGCACAATCTCTTCAGCAGGTGGGAAGCCAGATGTCCATATACATGGAATATGTTCATCCCGGTTCGCTGAAGAAATATATCGAACGTCAAGGTGCTTTAACAATATCATTAGTTCAAGATTTCACTGCACAAATTCTCTTTGGATTAGCTTACATACACAAGCAAGGCGTGGTTCACAGGGACATAAAAGGGGATAATATACTTGTGGATTCTGAGAACAATATTGTAAAGCTTGCTGACTTTGGTTTGGCTAAGAAACTAGCTGAATCTGTGGGCAAACACTCAGTGTCAGGAACTATATGTTATGCAGCTCCAGAGCTTTTGTGGGGAGGAGTATATAACAGCTCGGGTGAAGGATATGCTGCTGATATATGGAGTTTGGGCTGTGTAGTTATTGAAATGTTAACTGGCAAGCAACTTTGGCCTGATTGCACTAATCAGTCAAGGAGGAAGGTTAGAGAGCCAAAGGAAGAAACTGTTACCCTTGGCCCAACTGTCAGAGATGGGGAACATGTTTTTGGCGTAGCCCATATCTATGCATCATTTAATGATACATTCATTCACGTGACTGATTTGTCTGGAAGGGAAACCCTTGTTCGTATCACAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCCCCTTATGCTGCTATGCTTGCAGCACAGGATGTATCTGCTAGATGCAAGGAACTGGGCATAACCGCTCTTCATATCAAGCTCCGTGCCACTGGTGGAAACAAGACAAAAACGCCAGGTCCTGGTGCCCAGTCTGCTCTCCGTGCCCTTGCTCGTTCAGGAATGAAAATTGGCCGAATAGAGGATGTGACTCCGATCCCATCAGACAGCACCAGGAGAAAGGGTGGTAGAAGAGGAAGGAGGCTTTAA 1419 0.4278 MVRDLVQICRYIISTLICHVYMELSTALGARLGENSKALSRTGTLSDSKIKVTVEAVISCLDLFPPEGIKMIGIFGCGGIGKSTIARAVYDSIADHFEGSFFLSNAAMHTMKLGLRRKKILLILDDVDELYQLDALAGRFDLGHGSRFGIVHVGRNRRTGGLCAIKEILHIDDPLSAQSLQQVGSQMSIYMEYVHPGSLKKYIERQGALTISLVQDFTAQILFGLAYIHKQGVVHRDIKGDNILVDSENNIVKLADFGLAKKLAESVGKHSVSGTICYAAPELLWGGVYNSSGEGYAADIWSLGCVVIEMLTGKQLWPDCTNQSRRKVREPKEETVTLGPTVRDGEHVFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0537 472 SUPERFAMILY Translational machinery components 345 470 - -
Lele36g0537 472 FunFam 40S ribosomal protein S14 323 472 - -
Lele36g0537 472 Pfam Ribosomal protein S11 350 468 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele36g0537 472 ProSiteProfiles Protein kinase domain profile. 69 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0537 472 Gene3D Ribosomal protein S11 340 472 IPR036967 GO:0003735|GO:0005840|GO:0006412
Lele36g0537 472 Gene3D - 44 114 IPR027417 -
Lele36g0537 472 ProSitePatterns Ribosomal protein S11 signature. 437 459 IPR018102 -
Lele36g0537 472 MobiDBLite consensus disorder prediction 452 472 - -
Lele36g0537 472 Hamap 30S ribosomal protein S11 [rpsK]. 314 469 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele36g0537 472 Gene3D Transferase(Phosphotransferase) domain 1 139 339 - -
Lele36g0537 472 SUPERFAMILY Protein kinase-like (PK-like) 142 321 IPR011009 -
Lele36g0537 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 157 IPR027417 -
Lele36g0537 472 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 325 467 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele36g0537 472 SMART serkin_6 131 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0537 472 Pfam Protein kinase domain 184 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0537 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0537 Lele-ChrLele36 3470385 3480900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0537 324 461 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 89.855 2.56e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele36g0537 Pkinase 2.7e-42 CL0016