Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0511 ATGACAGACAGCAACGCCGCTGAGGGACTTCTGATCCTTGAAATAAGATTGTTTCTTATCATTGAAGAAATTGCAAACTGTTTGTCATACCTGATGGACTCAAAAACTAGTGCTAGAGCTGCCCAGAAACAGCATCATAAGACGGCTGGGATTCAAGCAATAGAGGAAAAAGACATCAAATCTTCAACGACGGGCAAATCTGAACTGGCTGCGCCAGAAGATTTATCAAAATATGTTAAGGACTCATCGAAGCATTACACTGGAGACACTTCTGAAAACAAGAAGCTAGAAATTTCAAAGCCAAAGGAGTCAGCTGATTCCTTGATTAGTAAATTTGGTTCTGCTGTTTCCTTGTCTGTTAATGAACAACTAACTGGAGGAGTTAACCATGTTAATGGAAATAGAGGTTTGCAAGAAAGCTCAATTGATCAAGAAAAGAAAACATCAGAATATGGAAGTGTGAAGAATAGTTCTGTTTCTGCTAAAGTTAGCGATGGGGCCAGCAGCCTGGCGAAGACCAGTGGAAGTGCCAAGATTAGTGATCGAGTTGATCTTGTTGAGAGTGGCAAGAGCAGTATTTGCAGGGGAAGTACAAGCAGTGATGTGAGCGATGAGAGCACTTGCAGCAGCTTTAGTAGCAGTGTCAACAAGCCTCACAAGGCAAATGACTTGAGATGGGAAGCTATTCAAGCTGTCCGATCTAAAGATGGGGCTTTGGGCTTAGGTCACTTTAGACTATTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTGTATCTGTCAGAGTTGAATGGAACTAAATGTTATTTCGCAATGAAGGTAATGGATAAAGGGTCTTTAGCGAGTCGTAAAAAGCTGCTTCGTGCTCAGACAGAAAGAGAGATACTGCAATCACTTGACCATCCATTTCTCCCAACATTGTATACCCATTTTGAGACAGAGAAGTTCTCATGCTTGGTAATGGAATTCTGCCCAGGTGGAGACCTGCACACTCTCAGGCAGAGGCAGCCAGGGAAGCATTTTCCTGAGCAAGCAGTGAAATTTTACGTGGCAGAGGTGCTGCTGGCGTTGGAGTACCTACACATGCTTGGCATTGTCTACCGTGATCTCAAGCCGGAAAATGTCCTTGTTAGGGATGATGGACACATTATGCTTTCGGATTTTGACCTTTCCCTCCGTTGTGCTGTTAGTCCAACTCTCGTTAAAAGTTCAGTCATGGAATCTGATCCTTTAAGAAAGAATCCTGTATATTGTGTGCAGCCCGCTTGTATTGAGCCGCCTTCCTGCATCCAGCCATCCTGTGTTGCTCCTACTACATGCTTTTCACCTCGGCTCTTTTCTAGCAAATCAAAGAAGGATCGGAAAACCAAAACTGAAATCGGAAACCAAGTGACCCCATTGCCCGAGCTCATTGCTGAGCCTACCGATGCACGATCTATGTCATTTGTCGGAACCCATGAATACTTGGCACCGGAGATCATCAAGGGAGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGAATCTTTCTGTATGAGCTTTTGTTCGGTAAGACTCCTTTCAAGGGATCTGGGAACCGAGCTACATTGTTTAATGTCGTAGGCCAGCCTCTCCGATTTCCAGAAGCGCCTGTTGTAAGTTTTGCAGCCAGGGATCTCATAAGGGGGTTGCTTGTGAAGGAACCACAGCACAGGCTGGCTTATAAACGAGGTGCCACCGAGATAAAGCAACATCCCTTTTTCGAAGGTGTGAATTGGGCACTTATTCGCTGCGCTACCCCACCGGAGATCCCAAAGCCTGTAGAGTATGAGAAGATAACTTCCTCGGCCTCATCAGCCGCCGAAAAAGCCGGCCAACACCACCATATGTCAATTCCTAATCAGAAAGGTTCTGGTAATTATCTTGAGTTTGATTTCTTCTAG 1926 0.4507 MTDSNAAEGLLILEIRLFLIIEEIANCLSYLMDSKTSARAAQKQHHKTAGIQAIEEKDIKSSTTGKSELAAPEDLSKYVKDSSKHYTGDTSENKKLEISKPKESADSLISKFGSAVSLSVNEQLTGGVNHVNGNRGLQESSIDQEKKTSEYGSVKNSSVSAKVSDGASSLAKTSGSAKISDRVDLVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDLRWEAIQAVRSKDGALGLGHFRLLKRLGCGDIGSVYLSELNGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSVMESDPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKTKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKITSSASSAAEKAGQHHHMSIPNQKGSGNYLEFDFF 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0511 641 CDD STKc_phototropin_like 243 601 - -
Lele36g0511 641 FunFam Serine/threonine-protein kinase D6PK-like 242 327 - -
Lele36g0511 641 SMART serkin_6 244 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0511 641 MobiDBLite consensus disorder prediction 80 100 - -
Lele36g0511 641 MobiDBLite consensus disorder prediction 609 628 - -
Lele36g0511 641 SUPERFAMILY Protein kinase-like (PK-like) 221 614 IPR011009 -
Lele36g0511 641 FunFam Serine/threonine-protein kinase AGC1-7 475 600 - -
Lele36g0511 641 MobiDBLite consensus disorder prediction 126 158 - -
Lele36g0511 641 ProSiteProfiles Protein kinase domain profile. 244 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0511 641 FunFam serine/threonine-protein kinase D6PK-like 328 395 - -
Lele36g0511 641 Gene3D Phosphorylase Kinase; domain 1 242 327 - -
Lele36g0511 641 Gene3D Transferase(Phosphotransferase) domain 1 476 600 - -
Lele36g0511 641 Gene3D Transferase(Phosphotransferase) domain 1 328 395 - -
Lele36g0511 641 MobiDBLite consensus disorder prediction 193 214 - -
Lele36g0511 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
Lele36g0511 641 PANTHER FLIPPASE KINASE 1-RELATED 49 608 - -
Lele36g0511 641 Pfam Protein kinase domain 245 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g0511 641 Pfam Protein kinase domain 479 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0511 Lele-ChrLele36 3239846 3244115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0511 92 641 AGC Kinase Gene Family AT5G47750 80.254 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele36g0511 Pkinase 1.5e-36 CL0016