Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g0505 ATGGACGACCTCTTCCCCGTCGACGATTTCCCTTACCACGTGGCCCCATTTCCCGATACCTCTGACCTCCTTTACACCCACCCCGCTCCGGCTTTTCACTATGCCGACGTCGCTGACCACCGTCGGCTTCTTAACCCCGCTCCACAGAAGCTTCGGCCCATCCGGAGCCTTGACCGGTCTTCTTCGCCGCCGTCGCTAGTCACCGAGATTACTGAGAATGGAGGGTTCGCTGGAGCGTCTAACGATGTGGGTTACCTTTGTCATCATTCAAGTAAGAATCTTGAGTTTCTTGATCAGCGAGTTGAGTCTTGCGAGGAGCTGAGGAAGGAAGCTGCCGATGATGTTGCCGTAAATGATTGCCTTCAGAAGGAGACTTCCGTGGGGCTCCGGAAGTGTCATACTTGTGACCCGAATGCCGATGAGTTTAAGTTAACGAAGGAATATGGTTCATCTTGGGACAATGATGATGATTCATCTGAAAGCGTGGAAGAACCCGGGAGTGGGAAGAAAAGAGAGAAGACTGTCACAAAGTTTGAAGCTTTTCTAGAAAATTTGGCGACGAAGGTGATGGAAAAGCAAGAGCAGATGCACAAGCAACTGCTGGTTATGATAGAGAAGAAAGAAAGGGAAAGAGCTATGAGAGAAGAAGCTTGGAAACAAAAGGAGATGGAGAGAATTAAAAAGGATGAGGAGACCAGAGCCCAAGAAAAATCTAACAACCTGGCTCTGATAGCATTAATTCAGAATTTACTGGGCCATGAAATTCAAATCCCCCAGCTAGCAGCAACCAGCTCAAGAGAGGAGGATAAAGAAGAAGGCGTAGCGAACATCCAAAAAGATTTCAAGAGTGATCAGAGTAACAATAATAGATGGCCAGAAGCTGAAGTGCAAGCGCTCATAACTCTAAGAACTTCCTCAGAACACGAATTTCGAGGGACGGGATCCAAAGTATCTCTATGGGAGGAGATATCTAAAGCAATGCATAATATGGGTTACAATCGTTCTGCGAAGAAGTGCAAGGAGAAATGGGAAAACATCAATAAGTATTATAAGAAAACGATGGAGAGTAGGAAGAAGCAACGACTAAATAGTAAAGCTTGCCCATACTTTGATGAGTTGGACATGCTCTACCGAAATCGGCTTCCGAATATAAGGAATGCCTTGAGCGACACCTCTATGTCATCAAAGACCGAAAAGGAATAA 1203 0.4613 MDDLFPVDDFPYHVAPFPDTSDLLYTHPAPAFHYADVADHRRLLNPAPQKLRPIRSLDRSSSPPSLVTEITENGGFAGASNDVGYLCHHSSKNLEFLDQRVESCEELRKEAADDVAVNDCLQKETSVGLRKCHTCDPNADEFKLTKEYGSSWDNDDDSSESVEEPGSGKKREKTVTKFEAFLENLATKVMEKQEQMHKQLLVMIEKKERERAMREEAWKQKEMERIKKDEETRAQEKSNNLALIALIQNLLGHEIQIPQLAATSSREEDKEEGVANIQKDFKSDQSNNNRWPEAEVQALITLRTSSEHEFRGTGSKVSLWEEISKAMHNMGYNRSAKKCKEKWENINKYYKKTMESRKKQRLNSKACPYFDELDMLYRNRLPNIRNALSDTSMSSKTEKE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g0505 400 CDD GT1 289 353 - -
Lele36g0505 400 ProSiteProfiles Myb-like domain profile. 283 347 IPR001005 -
Lele36g0505 400 MobiDBLite consensus disorder prediction 147 172 - -
Lele36g0505 400 Coils Coil 94 114 - -
Lele36g0505 400 Gene3D - 291 352 - -
Lele36g0505 400 FunFam Trihelix transcription factor GT-2 291 352 - -
Lele36g0505 400 SMART sant 287 349 IPR001005 -
Lele36g0505 400 Coils Coil 190 210 - -
Lele36g0505 400 Pfam Myb/SANT-like DNA-binding domain 289 375 IPR044822 -
Lele36g0505 400 PANTHER FI21293P1 139 390 - -
Lele36g0505 400 SUPERFAMILY Homeodomain-like 288 366 IPR009057 -
Lele36g0505 400 Coils Coil 220 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g0505 Lele-ChrLele36 3178413 3180614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g0505 167 379 Trihelix Transcription Factor Family AT5G47660 42.291 2.27e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele36g0505 Myb_DNA-bind_4 1.8e-21 CL0123